Gene : Sevir.4G141200 S. viridis v1.1
Defline:  (1 of 3) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1412
Name:  ? Sevir.4G141200 Secondary Identifier:  ? PAC:32648161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G141200 0.5kb upstream 0.5kb upstream 3059 true Chr_04: 18280632-18283690 Setaria viridis
Sevir.4G141200 0.5kb upstream 0.5kb upstream 500 false Chr_04: 18283191-18283690 Setaria viridis
Sevir.4G141200 0.5kb downstream 0.5kb downstream 3059 true Chr_04: 18280132-18283190 Setaria viridis
Sevir.4G141200 0.5kb downstream 0.5kb downstream 500 false Chr_04: 18280132-18280631 Setaria viridis
Sevir.4G141200 1.0kb upstream 1.0kb upstream 3559 true Chr_04: 18280632-18284190 Setaria viridis
Sevir.4G141200 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 18283191-18284190 Setaria viridis
Sevir.4G141200 1.0kb downstream 1.0kb downstream 3559 true Chr_04: 18279632-18283190 Setaria viridis
Sevir.4G141200 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 18279632-18280631 Setaria viridis
Sevir.4G141200 2.0kb upstream 2.0kb upstream 4559 true Chr_04: 18280632-18285190 Setaria viridis
Sevir.4G141200 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 18283191-18285190 Setaria viridis
Sevir.4G141200 2.0kb downstream 2.0kb downstream 4559 true Chr_04: 18278632-18283190 Setaria viridis
Sevir.4G141200 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 18278632-18280631 Setaria viridis
Sevir.4G141200 5.0kb upstream 5.0kb upstream 7559 true Chr_04: 18280632-18288190 Setaria viridis
Sevir.4G141200 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 18283191-18288190 Setaria viridis
Sevir.4G141200 5.0kb downstream 5.0kb downstream 7559 true Chr_04: 18275632-18283190 Setaria viridis
Sevir.4G141200 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 18275632-18280631 Setaria viridis
Sevir.4G141200 10.0kb upstream 10.0kb upstream 12559 true Chr_04: 18280632-18293190 Setaria viridis
Sevir.4G141200 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 18283191-18293190 Setaria viridis
Sevir.4G141200 10.0kb downstream 10.0kb downstream 12559 true Chr_04: 18270632-18283190 Setaria viridis
Sevir.4G141200 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 18270632-18280631 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain