Gene : Sevir.9G311500 S. viridis v1.1

Defline:  (1 of 1) K11352 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12 (NDUFA12) Genomic Order:  3115
Name:  ? Sevir.9G311500 Secondary Identifier:  ? PAC:32656191

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-4302 Setaria viridis pathologic  
Sviridis PWY-3781 Setaria viridis pathologic  
Sviridis PWY-5083 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G311500 0.5kb upstream 0.5kb upstream 3244 true Chr_09: 34130559-34133802 Setaria viridis
Sevir.9G311500 0.5kb upstream 0.5kb upstream 500 false Chr_09: 34130559-34131058 Setaria viridis
Sevir.9G311500 0.5kb downstream 0.5kb downstream 3244 true Chr_09: 34131059-34134302 Setaria viridis
Sevir.9G311500 0.5kb downstream 0.5kb downstream 500 false Chr_09: 34133803-34134302 Setaria viridis
Sevir.9G311500 1.0kb upstream 1.0kb upstream 3744 true Chr_09: 34130059-34133802 Setaria viridis
Sevir.9G311500 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 34130059-34131058 Setaria viridis
Sevir.9G311500 1.0kb downstream 1.0kb downstream 3744 true Chr_09: 34131059-34134802 Setaria viridis
Sevir.9G311500 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 34133803-34134802 Setaria viridis
Sevir.9G311500 2.0kb upstream 2.0kb upstream 4744 true Chr_09: 34129059-34133802 Setaria viridis
Sevir.9G311500 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 34129059-34131058 Setaria viridis
Sevir.9G311500 2.0kb downstream 2.0kb downstream 4744 true Chr_09: 34131059-34135802 Setaria viridis
Sevir.9G311500 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 34133803-34135802 Setaria viridis
Sevir.9G311500 5.0kb upstream 5.0kb upstream 7744 true Chr_09: 34126059-34133802 Setaria viridis
Sevir.9G311500 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 34126059-34131058 Setaria viridis
Sevir.9G311500 5.0kb downstream 5.0kb downstream 7744 true Chr_09: 34131059-34138802 Setaria viridis
Sevir.9G311500 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 34133803-34138802 Setaria viridis
Sevir.9G311500 10.0kb upstream 10.0kb upstream 12744 true Chr_09: 34121059-34133802 Setaria viridis
Sevir.9G311500 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 34121059-34131058 Setaria viridis
Sevir.9G311500 10.0kb downstream 10.0kb downstream 12744 true Chr_09: 34131059-34143802 Setaria viridis
Sevir.9G311500 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 34133803-34143802 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.884     High Low
cufflinks 17.88     High  
cufflinks 13.357     High Low
cufflinks 36.014     High High
cufflinks 31.48     High High
cufflinks 18.699     High  
cufflinks 15.596     High  
cufflinks 33.501     High High
cufflinks 14.657     High Low
cufflinks 23.722     High  
cufflinks 35.555     High High
cufflinks 14.632     High Low
cufflinks 25.309     High  
cufflinks 21.494     High  
cufflinks 25.135     High  
cufflinks 21.04     High  
cufflinks 40.18     High High
cufflinks 20.308     High  
cufflinks 20.247     High  

0 Strain