Gene : Sevir.4G200700 S. viridis v1.1
Defline:  (1 of 4) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  2007
Name:  ? Sevir.4G200700 Secondary Identifier:  ? PAC:32648138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G200700 0.5kb upstream 0.5kb upstream 3418 true Chr_04: 30384169-30387586 Setaria viridis
Sevir.4G200700 0.5kb upstream 0.5kb upstream 500 false Chr_04: 30387087-30387586 Setaria viridis
Sevir.4G200700 0.5kb downstream 0.5kb downstream 3418 true Chr_04: 30383669-30387086 Setaria viridis
Sevir.4G200700 0.5kb downstream 0.5kb downstream 500 false Chr_04: 30383669-30384168 Setaria viridis
Sevir.4G200700 1.0kb upstream 1.0kb upstream 3918 true Chr_04: 30384169-30388086 Setaria viridis
Sevir.4G200700 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 30387087-30388086 Setaria viridis
Sevir.4G200700 1.0kb downstream 1.0kb downstream 3918 true Chr_04: 30383169-30387086 Setaria viridis
Sevir.4G200700 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 30383169-30384168 Setaria viridis
Sevir.4G200700 2.0kb upstream 2.0kb upstream 4918 true Chr_04: 30384169-30389086 Setaria viridis
Sevir.4G200700 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 30387087-30389086 Setaria viridis
Sevir.4G200700 2.0kb downstream 2.0kb downstream 4918 true Chr_04: 30382169-30387086 Setaria viridis
Sevir.4G200700 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 30382169-30384168 Setaria viridis
Sevir.4G200700 5.0kb upstream 5.0kb upstream 7918 true Chr_04: 30384169-30392086 Setaria viridis
Sevir.4G200700 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 30387087-30392086 Setaria viridis
Sevir.4G200700 5.0kb downstream 5.0kb downstream 7918 true Chr_04: 30379169-30387086 Setaria viridis
Sevir.4G200700 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 30379169-30384168 Setaria viridis
Sevir.4G200700 10.0kb upstream 10.0kb upstream 12918 true Chr_04: 30384169-30397086 Setaria viridis
Sevir.4G200700 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 30387087-30397086 Setaria viridis
Sevir.4G200700 10.0kb downstream 10.0kb downstream 12918 true Chr_04: 30374169-30387086 Setaria viridis
Sevir.4G200700 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 30374169-30384168 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.375        
cufflinks 2.355        
cufflinks 0.706       Low
cufflinks 4.366        
cufflinks 1.546        
cufflinks 0.691       Low
cufflinks 20.227     High High
cufflinks 29.737     High High
cufflinks 0.573       Low
cufflinks 44.116     High High
cufflinks 5.784        
cufflinks 1.966        
cufflinks 17.698     High  
cufflinks 38.004     High High
cufflinks 0.759       Low
cufflinks 1.344        
cufflinks 3.994        
cufflinks 0.309       Low
cufflinks 31.497     High High

0 Strain