Gene : Sevir.4G253200 S. viridis v1.1
Defline:  (1 of 2) K12446 - L-arabinokinase (E2.7.1.46) Genomic Order:  2532
Name:  ? Sevir.4G253200 Secondary Identifier:  ? PAC:32649309
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-82 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G253200 0.5kb upstream 0.5kb upstream 8599 true Chr_04: 35947023-35955621 Setaria viridis
Sevir.4G253200 0.5kb upstream 0.5kb upstream 500 false Chr_04: 35955122-35955621 Setaria viridis
Sevir.4G253200 0.5kb downstream 0.5kb downstream 8599 true Chr_04: 35946523-35955121 Setaria viridis
Sevir.4G253200 0.5kb downstream 0.5kb downstream 500 false Chr_04: 35946523-35947022 Setaria viridis
Sevir.4G253200 1.0kb upstream 1.0kb upstream 9099 true Chr_04: 35947023-35956121 Setaria viridis
Sevir.4G253200 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 35955122-35956121 Setaria viridis
Sevir.4G253200 1.0kb downstream 1.0kb downstream 9099 true Chr_04: 35946023-35955121 Setaria viridis
Sevir.4G253200 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 35946023-35947022 Setaria viridis
Sevir.4G253200 2.0kb upstream 2.0kb upstream 10099 true Chr_04: 35947023-35957121 Setaria viridis
Sevir.4G253200 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 35955122-35957121 Setaria viridis
Sevir.4G253200 2.0kb downstream 2.0kb downstream 10099 true Chr_04: 35945023-35955121 Setaria viridis
Sevir.4G253200 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 35945023-35947022 Setaria viridis
Sevir.4G253200 5.0kb upstream 5.0kb upstream 13099 true Chr_04: 35947023-35960121 Setaria viridis
Sevir.4G253200 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 35955122-35960121 Setaria viridis
Sevir.4G253200 5.0kb downstream 5.0kb downstream 13099 true Chr_04: 35942023-35955121 Setaria viridis
Sevir.4G253200 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 35942023-35947022 Setaria viridis
Sevir.4G253200 10.0kb upstream 10.0kb upstream 18099 true Chr_04: 35947023-35965121 Setaria viridis
Sevir.4G253200 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 35955122-35965121 Setaria viridis
Sevir.4G253200 10.0kb downstream 10.0kb downstream 18099 true Chr_04: 35937023-35955121 Setaria viridis
Sevir.4G253200 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 35937023-35947022 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.312        
cufflinks 0.328       Low
cufflinks 5.937        
cufflinks 3.521        
cufflinks 0.709       Low
cufflinks 4.721        
cufflinks 4.807        
cufflinks 4.615        
cufflinks 0.979       Low
cufflinks 5.378        
cufflinks 5.677        
cufflinks 4.333        
cufflinks 14.216     High High
cufflinks 8.467        
cufflinks 0.463       Low
cufflinks 4.723        
cufflinks 6.334        
cufflinks 5.906        
cufflinks 5.9        

0 Strain