Gene : Sevir.9G538700 S. viridis v1.1
Defline:  (1 of 1) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  5387
Name:  ? Sevir.9G538700 Secondary Identifier:  ? PAC:32657162
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis SER-GLYSYN-PWY Setaria viridis pathologic  
Sviridis SERSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G538700 0.5kb upstream 0.5kb upstream 2599 true Chr_09: 53107003-53109601 Setaria viridis
Sevir.9G538700 0.5kb upstream 0.5kb upstream 500 false Chr_09: 53109102-53109601 Setaria viridis
Sevir.9G538700 0.5kb downstream 0.5kb downstream 2599 true Chr_09: 53106503-53109101 Setaria viridis
Sevir.9G538700 0.5kb downstream 0.5kb downstream 500 false Chr_09: 53106503-53107002 Setaria viridis
Sevir.9G538700 1.0kb upstream 1.0kb upstream 3099 true Chr_09: 53107003-53110101 Setaria viridis
Sevir.9G538700 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 53109102-53110101 Setaria viridis
Sevir.9G538700 1.0kb downstream 1.0kb downstream 3099 true Chr_09: 53106003-53109101 Setaria viridis
Sevir.9G538700 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 53106003-53107002 Setaria viridis
Sevir.9G538700 2.0kb upstream 2.0kb upstream 4099 true Chr_09: 53107003-53111101 Setaria viridis
Sevir.9G538700 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 53109102-53111101 Setaria viridis
Sevir.9G538700 2.0kb downstream 2.0kb downstream 4099 true Chr_09: 53105003-53109101 Setaria viridis
Sevir.9G538700 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 53105003-53107002 Setaria viridis
Sevir.9G538700 5.0kb upstream 5.0kb upstream 7099 true Chr_09: 53107003-53114101 Setaria viridis
Sevir.9G538700 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 53109102-53114101 Setaria viridis
Sevir.9G538700 5.0kb downstream 5.0kb downstream 7099 true Chr_09: 53102003-53109101 Setaria viridis
Sevir.9G538700 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 53102003-53107002 Setaria viridis
Sevir.9G538700 10.0kb upstream 10.0kb upstream 12099 true Chr_09: 53107003-53119101 Setaria viridis
Sevir.9G538700 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 53109102-53119101 Setaria viridis
Sevir.9G538700 10.0kb downstream 10.0kb downstream 12099 true Chr_09: 53097003-53109101 Setaria viridis
Sevir.9G538700 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 53097003-53107002 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.222       Low
cufflinks 43.558     High High
cufflinks 38.439     High High
cufflinks 29.736     High  
cufflinks 42.353     High High
cufflinks 46.821     High High
cufflinks 18.74     High  
cufflinks 22.779     High  
cufflinks 15.42     High  
cufflinks 4.779       Low
cufflinks 5.201       Low
cufflinks 10.935     High  
cufflinks 6.855       Low
cufflinks 6.88       Low
cufflinks 16.066     High  
cufflinks 19.847     High  
cufflinks 17.696     High  
cufflinks 12.082     High  
cufflinks 11.286        

0 Strain