Gene : Sevir.5G191900 S. viridis v1.1
Defline:  (1 of 1) PF00005//PF00664//PF05783 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) // Dynein light intermediate chain (DLIC) (DLIC) Genomic Order:  1919
Name:  ? Sevir.5G191900 Secondary Identifier:  ? PAC:32671826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G191900 0.5kb upstream 0.5kb upstream 16649 true Chr_05: 23049210-23065858 Setaria viridis
Sevir.5G191900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 23049210-23049709 Setaria viridis
Sevir.5G191900 0.5kb downstream 0.5kb downstream 16649 true Chr_05: 23049710-23066358 Setaria viridis
Sevir.5G191900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 23065859-23066358 Setaria viridis
Sevir.5G191900 1.0kb upstream 1.0kb upstream 17149 true Chr_05: 23048710-23065858 Setaria viridis
Sevir.5G191900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 23048710-23049709 Setaria viridis
Sevir.5G191900 1.0kb downstream 1.0kb downstream 17149 true Chr_05: 23049710-23066858 Setaria viridis
Sevir.5G191900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 23065859-23066858 Setaria viridis
Sevir.5G191900 2.0kb upstream 2.0kb upstream 18149 true Chr_05: 23047710-23065858 Setaria viridis
Sevir.5G191900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 23047710-23049709 Setaria viridis
Sevir.5G191900 2.0kb downstream 2.0kb downstream 18149 true Chr_05: 23049710-23067858 Setaria viridis
Sevir.5G191900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 23065859-23067858 Setaria viridis
Sevir.5G191900 5.0kb upstream 5.0kb upstream 21149 true Chr_05: 23044710-23065858 Setaria viridis
Sevir.5G191900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 23044710-23049709 Setaria viridis
Sevir.5G191900 5.0kb downstream 5.0kb downstream 21149 true Chr_05: 23049710-23070858 Setaria viridis
Sevir.5G191900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 23065859-23070858 Setaria viridis
Sevir.5G191900 10.0kb upstream 10.0kb upstream 26149 true Chr_05: 23039710-23065858 Setaria viridis
Sevir.5G191900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 23039710-23049709 Setaria viridis
Sevir.5G191900 10.0kb downstream 10.0kb downstream 26149 true Chr_05: 23049710-23075858 Setaria viridis
Sevir.5G191900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 23065859-23075858 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.217       High
cufflinks 0.029     Low  
cufflinks 0.083     Low  
cufflinks 0.069     Low  
cufflinks 0.061     Low  
cufflinks 0.146        
cufflinks 0.005     Low Low
cufflinks 0.16        
cufflinks 0.137        
cufflinks 0.021     Low  
cufflinks 0.005     Low Low
cufflinks 0.006     Low Low
cufflinks 0.15        
cufflinks 0.052     Low  
cufflinks 0.016     Low  
cufflinks 0.086     Low  
cufflinks 0.314       High
cufflinks 0.057     Low  
cufflinks 0.126        

0 Strain