Gene : Sevir.2G250300 S. viridis v1.1
Defline:  (1 of 1) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  2503
Name:  ? Sevir.2G250300 Secondary Identifier:  ? PAC:32638447
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6124 Setaria viridis pathologic  
Sviridis PWY-841 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G250300 0.5kb upstream 0.5kb upstream 4728 true Chr_02: 33391676-33396403 Setaria viridis
Sevir.2G250300 0.5kb upstream 0.5kb upstream 500 false Chr_02: 33395904-33396403 Setaria viridis
Sevir.2G250300 0.5kb downstream 0.5kb downstream 4728 true Chr_02: 33391176-33395903 Setaria viridis
Sevir.2G250300 0.5kb downstream 0.5kb downstream 500 false Chr_02: 33391176-33391675 Setaria viridis
Sevir.2G250300 1.0kb upstream 1.0kb upstream 5228 true Chr_02: 33391676-33396903 Setaria viridis
Sevir.2G250300 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 33395904-33396903 Setaria viridis
Sevir.2G250300 1.0kb downstream 1.0kb downstream 5228 true Chr_02: 33390676-33395903 Setaria viridis
Sevir.2G250300 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 33390676-33391675 Setaria viridis
Sevir.2G250300 2.0kb upstream 2.0kb upstream 6228 true Chr_02: 33391676-33397903 Setaria viridis
Sevir.2G250300 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 33395904-33397903 Setaria viridis
Sevir.2G250300 2.0kb downstream 2.0kb downstream 6228 true Chr_02: 33389676-33395903 Setaria viridis
Sevir.2G250300 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 33389676-33391675 Setaria viridis
Sevir.2G250300 5.0kb upstream 5.0kb upstream 9228 true Chr_02: 33391676-33400903 Setaria viridis
Sevir.2G250300 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 33395904-33400903 Setaria viridis
Sevir.2G250300 5.0kb downstream 5.0kb downstream 9228 true Chr_02: 33386676-33395903 Setaria viridis
Sevir.2G250300 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 33386676-33391675 Setaria viridis
Sevir.2G250300 10.0kb upstream 10.0kb upstream 14228 true Chr_02: 33391676-33405903 Setaria viridis
Sevir.2G250300 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 33395904-33405903 Setaria viridis
Sevir.2G250300 10.0kb downstream 10.0kb downstream 14228 true Chr_02: 33381676-33395903 Setaria viridis
Sevir.2G250300 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 33381676-33391675 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.926        
cufflinks 5.604        
cufflinks 5.824        
cufflinks 3.996       Low
cufflinks 6.213        
cufflinks 7.955       High
cufflinks 6.624        
cufflinks 6.838        
cufflinks 5.378        
cufflinks 5.643        
cufflinks 7.702       High
cufflinks 4.654       Low
cufflinks 6.449        
cufflinks 6.444        
cufflinks 7.524       High
cufflinks 4.694       Low
cufflinks 5.096        
cufflinks 7.698       High
cufflinks 6.531        

0 Strain