Gene : Sevir.2G168700 S. viridis v1.1
Defline:  (1 of 1) PTHR11452//PTHR11452:SF32 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1687
Name:  ? Sevir.2G168700 Secondary Identifier:  ? PAC:32638662
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6527 Setaria viridis pathologic  
Sviridis PWY0-1301 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G168700 0.5kb upstream 0.5kb upstream 8260 true Chr_02: 23135700-23143959 Setaria viridis
Sevir.2G168700 0.5kb upstream 0.5kb upstream 500 false Chr_02: 23143460-23143959 Setaria viridis
Sevir.2G168700 0.5kb downstream 0.5kb downstream 8260 true Chr_02: 23135200-23143459 Setaria viridis
Sevir.2G168700 0.5kb downstream 0.5kb downstream 500 false Chr_02: 23135200-23135699 Setaria viridis
Sevir.2G168700 1.0kb upstream 1.0kb upstream 8760 true Chr_02: 23135700-23144459 Setaria viridis
Sevir.2G168700 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 23143460-23144459 Setaria viridis
Sevir.2G168700 1.0kb downstream 1.0kb downstream 8760 true Chr_02: 23134700-23143459 Setaria viridis
Sevir.2G168700 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 23134700-23135699 Setaria viridis
Sevir.2G168700 2.0kb upstream 2.0kb upstream 9760 true Chr_02: 23135700-23145459 Setaria viridis
Sevir.2G168700 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 23143460-23145459 Setaria viridis
Sevir.2G168700 2.0kb downstream 2.0kb downstream 9760 true Chr_02: 23133700-23143459 Setaria viridis
Sevir.2G168700 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 23133700-23135699 Setaria viridis
Sevir.2G168700 5.0kb upstream 5.0kb upstream 12760 true Chr_02: 23135700-23148459 Setaria viridis
Sevir.2G168700 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 23143460-23148459 Setaria viridis
Sevir.2G168700 5.0kb downstream 5.0kb downstream 12760 true Chr_02: 23130700-23143459 Setaria viridis
Sevir.2G168700 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 23130700-23135699 Setaria viridis
Sevir.2G168700 10.0kb upstream 10.0kb upstream 17760 true Chr_02: 23135700-23153459 Setaria viridis
Sevir.2G168700 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 23143460-23153459 Setaria viridis
Sevir.2G168700 10.0kb downstream 10.0kb downstream 17760 true Chr_02: 23125700-23143459 Setaria viridis
Sevir.2G168700 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 23125700-23135699 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low  
cufflinks 0.004     Low Low
cufflinks 0.149       High
cufflinks 0.006     Low  
cufflinks 0.012     Low  
cufflinks 0.11     Low High
cufflinks 0.01     Low  
cufflinks 0.088     Low High
cufflinks 0.01     Low  
cufflinks 0.016     Low  
cufflinks 0.272       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.059     Low  
cufflinks 0.025     Low  
cufflinks 0.01     Low  
cufflinks 0.051     Low  
cufflinks 0.014     Low  
cufflinks 0.002     Low Low
cufflinks 0.006     Low  

0 Strain