Gene : Seita.1G049500 S. italica v2.2
Defline:  (1 of 1) PTHR11040:SF46 - PROTEIN ZNTB Genomic Order:  495
Name:  ? Seita.1G049500 Secondary Identifier:  ? PAC:32694840
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G049500 0.5kb upstream 0.5kb upstream 5653 true scaffold_1: 4809188-4814840 Setaria italica
Seita.1G049500 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4814341-4814840 Setaria italica
Seita.1G049500 0.5kb downstream 0.5kb downstream 5653 true scaffold_1: 4808688-4814340 Setaria italica
Seita.1G049500 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4808688-4809187 Setaria italica
Seita.1G049500 1.0kb upstream 1.0kb upstream 6153 true scaffold_1: 4809188-4815340 Setaria italica
Seita.1G049500 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4814341-4815340 Setaria italica
Seita.1G049500 1.0kb downstream 1.0kb downstream 6153 true scaffold_1: 4808188-4814340 Setaria italica
Seita.1G049500 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4808188-4809187 Setaria italica
Seita.1G049500 2.0kb upstream 2.0kb upstream 7153 true scaffold_1: 4809188-4816340 Setaria italica
Seita.1G049500 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4814341-4816340 Setaria italica
Seita.1G049500 2.0kb downstream 2.0kb downstream 7153 true scaffold_1: 4807188-4814340 Setaria italica
Seita.1G049500 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4807188-4809187 Setaria italica
Seita.1G049500 5.0kb upstream 5.0kb upstream 10153 true scaffold_1: 4809188-4819340 Setaria italica
Seita.1G049500 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4814341-4819340 Setaria italica
Seita.1G049500 5.0kb downstream 5.0kb downstream 10153 true scaffold_1: 4804188-4814340 Setaria italica
Seita.1G049500 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4804188-4809187 Setaria italica
Seita.1G049500 10.0kb upstream 10.0kb upstream 15153 true scaffold_1: 4809188-4824340 Setaria italica
Seita.1G049500 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4814341-4824340 Setaria italica
Seita.1G049500 10.0kb downstream 10.0kb downstream 15153 true scaffold_1: 4799188-4814340 Setaria italica
Seita.1G049500 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4799188-4809187 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195580 5267 Panicoideae View MSA
124589221 5269 Grass View MSA
122050500 5273 Angiosperm View MSA
121344991 5274 Embryophyte View MSA
123426288 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34        
cufflinks 5.213        
cufflinks 6.964        
cufflinks 7.274        
cufflinks 4.6        
cufflinks 5.82        
cufflinks 3.737       Low
cufflinks 6.134        
cufflinks 3.947       Low
cufflinks 6.051        
cufflinks 4.9        
cufflinks 4.497        
cufflinks 7.614       High
cufflinks 7.305        
cufflinks 10.187       High
cufflinks 3.993       Low
cufflinks 7.423        
cufflinks 3.944       Low
cufflinks 6.497        
cufflinks 7.345        

0 Strain