Gene : Seita.1G061300 S. italica v2.2
Defline:  (1 of 1) PTHR11638:SF86 - CHAPERONE PROTEIN CLPB4, MITOCHONDRIAL Genomic Order:  613
Name:  ? Seita.1G061300 Secondary Identifier:  ? PAC:32695877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G061300 0.5kb upstream 0.5kb upstream 7268 true scaffold_1: 5797266-5804533 Setaria italica
Seita.1G061300 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5797266-5797765 Setaria italica
Seita.1G061300 0.5kb downstream 0.5kb downstream 7268 true scaffold_1: 5797766-5805033 Setaria italica
Seita.1G061300 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5804534-5805033 Setaria italica
Seita.1G061300 1.0kb upstream 1.0kb upstream 7768 true scaffold_1: 5796766-5804533 Setaria italica
Seita.1G061300 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5796766-5797765 Setaria italica
Seita.1G061300 1.0kb downstream 1.0kb downstream 7768 true scaffold_1: 5797766-5805533 Setaria italica
Seita.1G061300 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5804534-5805533 Setaria italica
Seita.1G061300 2.0kb upstream 2.0kb upstream 8768 true scaffold_1: 5795766-5804533 Setaria italica
Seita.1G061300 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5795766-5797765 Setaria italica
Seita.1G061300 2.0kb downstream 2.0kb downstream 8768 true scaffold_1: 5797766-5806533 Setaria italica
Seita.1G061300 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5804534-5806533 Setaria italica
Seita.1G061300 5.0kb upstream 5.0kb upstream 11768 true scaffold_1: 5792766-5804533 Setaria italica
Seita.1G061300 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5792766-5797765 Setaria italica
Seita.1G061300 5.0kb downstream 5.0kb downstream 11768 true scaffold_1: 5797766-5809533 Setaria italica
Seita.1G061300 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5804534-5809533 Setaria italica
Seita.1G061300 10.0kb upstream 10.0kb upstream 16768 true scaffold_1: 5787766-5804533 Setaria italica
Seita.1G061300 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5787766-5797765 Setaria italica
Seita.1G061300 10.0kb downstream 10.0kb downstream 16768 true scaffold_1: 5797766-5814533 Setaria italica
Seita.1G061300 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5804534-5814533 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177364 5267 Panicoideae View MSA
124571757 5269 Grass View MSA
122042746 5273 Angiosperm View MSA
121310015 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.801       High
cufflinks 2.896        
cufflinks 0.398       Low
cufflinks 0.367       Low
cufflinks 0.661       Low
cufflinks 2.014        
cufflinks 1.932        
cufflinks 1.044        
cufflinks 1.087        
cufflinks 1.363        
cufflinks 2.048        
cufflinks 2.35        
cufflinks 1.008        
cufflinks 0.698        
cufflinks 2.128        
cufflinks 3.083        
cufflinks 1.101        
cufflinks 9.919       High
cufflinks 0.963        
cufflinks 1.226        

0 Strain