Gene : Seita.1G063700 S. italica v2.2
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Genomic Order:  637
Name:  ? Seita.1G063700 Secondary Identifier:  ? PAC:32697350
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G063700 0.5kb upstream 0.5kb upstream 2835 true scaffold_1: 6020859-6023693 Setaria italica
Seita.1G063700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6020859-6021358 Setaria italica
Seita.1G063700 0.5kb downstream 0.5kb downstream 2835 true scaffold_1: 6021359-6024193 Setaria italica
Seita.1G063700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6023694-6024193 Setaria italica
Seita.1G063700 1.0kb upstream 1.0kb upstream 3335 true scaffold_1: 6020359-6023693 Setaria italica
Seita.1G063700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6020359-6021358 Setaria italica
Seita.1G063700 1.0kb downstream 1.0kb downstream 3335 true scaffold_1: 6021359-6024693 Setaria italica
Seita.1G063700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6023694-6024693 Setaria italica
Seita.1G063700 2.0kb upstream 2.0kb upstream 4335 true scaffold_1: 6019359-6023693 Setaria italica
Seita.1G063700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6019359-6021358 Setaria italica
Seita.1G063700 2.0kb downstream 2.0kb downstream 4335 true scaffold_1: 6021359-6025693 Setaria italica
Seita.1G063700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6023694-6025693 Setaria italica
Seita.1G063700 5.0kb upstream 5.0kb upstream 7335 true scaffold_1: 6016359-6023693 Setaria italica
Seita.1G063700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6016359-6021358 Setaria italica
Seita.1G063700 5.0kb downstream 5.0kb downstream 7335 true scaffold_1: 6021359-6028693 Setaria italica
Seita.1G063700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6023694-6028693 Setaria italica
Seita.1G063700 10.0kb upstream 10.0kb upstream 12335 true scaffold_1: 6011359-6023693 Setaria italica
Seita.1G063700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6011359-6021358 Setaria italica
Seita.1G063700 10.0kb downstream 10.0kb downstream 12335 true scaffold_1: 6021359-6033693 Setaria italica
Seita.1G063700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6023694-6033693 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184925 5267 Panicoideae View MSA
124579921 5269 Grass View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.916        
cufflinks 1.412        
cufflinks 0.076     Low Low
cufflinks 0.219        
cufflinks 0.284        
cufflinks 1.412        
cufflinks 0.937        
cufflinks 1.799        
cufflinks 0.484        
cufflinks 1.535        
cufflinks 0.873        
cufflinks 1.393        
cufflinks 1.287        
cufflinks 0.033     Low Low
cufflinks 1.49        
cufflinks 0.211        
cufflinks 2.178       High
cufflinks 0.113       Low
cufflinks 0.053     Low Low
cufflinks 2.152       High

0 Strain