Gene : Seita.1G072600 S. italica v2.2
Genomic Order:  726 Name:  ? Seita.1G072600
Secondary Identifier:  ? PAC:32693915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G072600 0.5kb upstream 0.5kb upstream 2604 true scaffold_1: 6632144-6634747 Setaria italica
Seita.1G072600 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6632144-6632643 Setaria italica
Seita.1G072600 0.5kb downstream 0.5kb downstream 2604 true scaffold_1: 6632644-6635247 Setaria italica
Seita.1G072600 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6634748-6635247 Setaria italica
Seita.1G072600 1.0kb upstream 1.0kb upstream 3104 true scaffold_1: 6631644-6634747 Setaria italica
Seita.1G072600 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6631644-6632643 Setaria italica
Seita.1G072600 1.0kb downstream 1.0kb downstream 3104 true scaffold_1: 6632644-6635747 Setaria italica
Seita.1G072600 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6634748-6635747 Setaria italica
Seita.1G072600 2.0kb upstream 2.0kb upstream 4104 true scaffold_1: 6630644-6634747 Setaria italica
Seita.1G072600 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6630644-6632643 Setaria italica
Seita.1G072600 2.0kb downstream 2.0kb downstream 4104 true scaffold_1: 6632644-6636747 Setaria italica
Seita.1G072600 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6634748-6636747 Setaria italica
Seita.1G072600 5.0kb upstream 5.0kb upstream 7104 true scaffold_1: 6627644-6634747 Setaria italica
Seita.1G072600 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6627644-6632643 Setaria italica
Seita.1G072600 5.0kb downstream 5.0kb downstream 7104 true scaffold_1: 6632644-6639747 Setaria italica
Seita.1G072600 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6634748-6639747 Setaria italica
Seita.1G072600 10.0kb upstream 10.0kb upstream 12104 true scaffold_1: 6622644-6634747 Setaria italica
Seita.1G072600 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6622644-6632643 Setaria italica
Seita.1G072600 10.0kb downstream 10.0kb downstream 12104 true scaffold_1: 6632644-6644747 Setaria italica
Seita.1G072600 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6634748-6644747 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026396 5273 Angiosperm View MSA
122189999 5267 Panicoideae View MSA
124571732 5269 Grass View MSA
121296309 5274 Embryophyte View MSA
123334495 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.819        
cufflinks 11.655       High
cufflinks 4.148       Low
cufflinks 4.31       Low
cufflinks 4.619       Low
cufflinks 11.792       High
cufflinks 6.995        
cufflinks 6.901        
cufflinks 6.372        
cufflinks 5.162        
cufflinks 5.736        
cufflinks 11.349       High
cufflinks 7.565        
cufflinks 5.788        
cufflinks 9.518        
cufflinks 5.063        
cufflinks 11.394       High
cufflinks 7.244        
cufflinks 4.702       Low
cufflinks 9.349        

0 Strain