Gene : Seita.1G010300 S. italica v2.2
Defline:  (1 of 1) PTHR16057 - WINS1, 2 PROTEIN Genomic Order:  103
Name:  ? Seita.1G010300 Secondary Identifier:  ? PAC:32694392
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G010300 0.5kb upstream 0.5kb upstream 8803 true scaffold_1: 779642-788444 Setaria italica
Seita.1G010300 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 787945-788444 Setaria italica
Seita.1G010300 0.5kb downstream 0.5kb downstream 8803 true scaffold_1: 779142-787944 Setaria italica
Seita.1G010300 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 779142-779641 Setaria italica
Seita.1G010300 1.0kb upstream 1.0kb upstream 9303 true scaffold_1: 779642-788944 Setaria italica
Seita.1G010300 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 787945-788944 Setaria italica
Seita.1G010300 1.0kb downstream 1.0kb downstream 9303 true scaffold_1: 778642-787944 Setaria italica
Seita.1G010300 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 778642-779641 Setaria italica
Seita.1G010300 2.0kb upstream 2.0kb upstream 10303 true scaffold_1: 779642-789944 Setaria italica
Seita.1G010300 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 787945-789944 Setaria italica
Seita.1G010300 2.0kb downstream 2.0kb downstream 10303 true scaffold_1: 777642-787944 Setaria italica
Seita.1G010300 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 777642-779641 Setaria italica
Seita.1G010300 5.0kb upstream 5.0kb upstream 13303 true scaffold_1: 779642-792944 Setaria italica
Seita.1G010300 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 787945-792944 Setaria italica
Seita.1G010300 5.0kb downstream 5.0kb downstream 13303 true scaffold_1: 774642-787944 Setaria italica
Seita.1G010300 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 774642-779641 Setaria italica
Seita.1G010300 10.0kb upstream 10.0kb upstream 18303 true scaffold_1: 779642-797944 Setaria italica
Seita.1G010300 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 787945-797944 Setaria italica
Seita.1G010300 10.0kb downstream 10.0kb downstream 18303 true scaffold_1: 769642-787944 Setaria italica
Seita.1G010300 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 769642-779641 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186255 5267 Panicoideae View MSA
124576360 5269 Grass View MSA
122042842 5273 Angiosperm View MSA
121348888 5274 Embryophyte View MSA
123381062 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.552       High
cufflinks 0.379        
cufflinks 0.543       High
cufflinks 0.43        
cufflinks 0.372        
cufflinks 0.359        
cufflinks 0.446        
cufflinks 0.462        
cufflinks 0.341        
cufflinks 0.433        
cufflinks 0.421        
cufflinks 0.357        
cufflinks 0.278       Low
cufflinks 0.376        
cufflinks 0.333        
cufflinks 0.713       High
cufflinks 0.366        
cufflinks 0.648       High
cufflinks 0.338        
cufflinks 0.323       Low

0 Strain