Gene : Seita.1G012200 S. italica v2.2
Defline:  (1 of 1) PTHR33322:SF4 - BAG FAMILY MOLECULAR CHAPERONE REGULATOR 6 Genomic Order:  122
Name:  ? Seita.1G012200 Secondary Identifier:  ? PAC:32696246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G012200 0.5kb upstream 0.5kb upstream 7348 true scaffold_1: 966704-974051 Setaria italica
Seita.1G012200 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 973552-974051 Setaria italica
Seita.1G012200 0.5kb downstream 0.5kb downstream 7348 true scaffold_1: 966204-973551 Setaria italica
Seita.1G012200 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 966204-966703 Setaria italica
Seita.1G012200 1.0kb upstream 1.0kb upstream 7848 true scaffold_1: 966704-974551 Setaria italica
Seita.1G012200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 973552-974551 Setaria italica
Seita.1G012200 1.0kb downstream 1.0kb downstream 7848 true scaffold_1: 965704-973551 Setaria italica
Seita.1G012200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 965704-966703 Setaria italica
Seita.1G012200 2.0kb upstream 2.0kb upstream 8848 true scaffold_1: 966704-975551 Setaria italica
Seita.1G012200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 973552-975551 Setaria italica
Seita.1G012200 2.0kb downstream 2.0kb downstream 8848 true scaffold_1: 964704-973551 Setaria italica
Seita.1G012200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 964704-966703 Setaria italica
Seita.1G012200 5.0kb upstream 5.0kb upstream 11848 true scaffold_1: 966704-978551 Setaria italica
Seita.1G012200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 973552-978551 Setaria italica
Seita.1G012200 5.0kb downstream 5.0kb downstream 11848 true scaffold_1: 961704-973551 Setaria italica
Seita.1G012200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 961704-966703 Setaria italica
Seita.1G012200 10.0kb upstream 10.0kb upstream 16848 true scaffold_1: 966704-983551 Setaria italica
Seita.1G012200 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 973552-983551 Setaria italica
Seita.1G012200 10.0kb downstream 10.0kb downstream 16848 true scaffold_1: 956704-973551 Setaria italica
Seita.1G012200 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 956704-966703 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195605 5267 Panicoideae View MSA
124581527 5269 Grass View MSA
122051484 5273 Angiosperm View MSA
121349180 5274 Embryophyte View MSA
123381200 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.842     High  
cufflinks 37.477     High  
cufflinks 39.362     High  
cufflinks 21.411     High  
cufflinks 22.119     High  
cufflinks 61.11     High  
cufflinks 10.1        
cufflinks 15.046     High  
cufflinks 13.573     High  
cufflinks 48.514     High  
cufflinks 104.634     High High
cufflinks 20.437     High  
cufflinks 12.269        
cufflinks 122.085     High High
cufflinks 11.985        
cufflinks 43.499     High  
cufflinks 3.848       Low
cufflinks 347.598     High High
cufflinks 61.27     High  
cufflinks 2.808       Low

0 Strain