Gene : Seita.1G031100 S. italica v2.2
Defline:  (1 of 1) PTHR20889//PTHR20889:SF5 - PHOSPHATASE, ORPHAN 1, 2 Genomic Order:  311
Name:  ? Seita.1G031100 Secondary Identifier:  ? PAC:32693907
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G031100 0.5kb upstream 0.5kb upstream 2036 true scaffold_1: 2913024-2915059 Setaria italica
Seita.1G031100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2914560-2915059 Setaria italica
Seita.1G031100 0.5kb downstream 0.5kb downstream 2036 true scaffold_1: 2912524-2914559 Setaria italica
Seita.1G031100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2912524-2913023 Setaria italica
Seita.1G031100 1.0kb upstream 1.0kb upstream 2536 true scaffold_1: 2913024-2915559 Setaria italica
Seita.1G031100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2914560-2915559 Setaria italica
Seita.1G031100 1.0kb downstream 1.0kb downstream 2536 true scaffold_1: 2912024-2914559 Setaria italica
Seita.1G031100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2912024-2913023 Setaria italica
Seita.1G031100 2.0kb upstream 2.0kb upstream 3536 true scaffold_1: 2913024-2916559 Setaria italica
Seita.1G031100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2914560-2916559 Setaria italica
Seita.1G031100 2.0kb downstream 2.0kb downstream 3536 true scaffold_1: 2911024-2914559 Setaria italica
Seita.1G031100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2911024-2913023 Setaria italica
Seita.1G031100 5.0kb upstream 5.0kb upstream 6536 true scaffold_1: 2913024-2919559 Setaria italica
Seita.1G031100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2914560-2919559 Setaria italica
Seita.1G031100 5.0kb downstream 5.0kb downstream 6536 true scaffold_1: 2908024-2914559 Setaria italica
Seita.1G031100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2908024-2913023 Setaria italica
Seita.1G031100 10.0kb upstream 10.0kb upstream 11536 true scaffold_1: 2913024-2924559 Setaria italica
Seita.1G031100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2914560-2924559 Setaria italica
Seita.1G031100 10.0kb downstream 10.0kb downstream 11536 true scaffold_1: 2903024-2914559 Setaria italica
Seita.1G031100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2903024-2913023 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122180505 5267 Panicoideae View MSA
124572114 5269 Grass View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.565        
cufflinks 0.165        
cufflinks 0.853        
cufflinks 0.112       Low
cufflinks 0.262        
cufflinks 0.196        
cufflinks 0.867        
cufflinks 1.475        
cufflinks 0.361        
cufflinks 1.848        
cufflinks 1.991        
cufflinks 3.019        
cufflinks 1.303        
cufflinks 4.625       High
cufflinks 0.684        
cufflinks 0.013     Low Low
cufflinks 1.828        
cufflinks 0.07     Low Low
cufflinks 2.942        
cufflinks 5.782       High

0 Strain