Gene : Seita.1G121500 S. italica v2.2
Genomic Order:  1215 Name:  ? Seita.1G121500
Secondary Identifier:  ? PAC:32697196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G121500 0.5kb upstream 0.5kb upstream 1366 true scaffold_1: 10471471-10472836 Setaria italica
Seita.1G121500 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10471471-10471970 Setaria italica
Seita.1G121500 0.5kb downstream 0.5kb downstream 1366 true scaffold_1: 10471971-10473336 Setaria italica
Seita.1G121500 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10472837-10473336 Setaria italica
Seita.1G121500 1.0kb upstream 1.0kb upstream 1866 true scaffold_1: 10470971-10472836 Setaria italica
Seita.1G121500 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10470971-10471970 Setaria italica
Seita.1G121500 1.0kb downstream 1.0kb downstream 1866 true scaffold_1: 10471971-10473836 Setaria italica
Seita.1G121500 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10472837-10473836 Setaria italica
Seita.1G121500 2.0kb upstream 2.0kb upstream 2866 true scaffold_1: 10469971-10472836 Setaria italica
Seita.1G121500 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10469971-10471970 Setaria italica
Seita.1G121500 2.0kb downstream 2.0kb downstream 2866 true scaffold_1: 10471971-10474836 Setaria italica
Seita.1G121500 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10472837-10474836 Setaria italica
Seita.1G121500 5.0kb upstream 5.0kb upstream 5866 true scaffold_1: 10466971-10472836 Setaria italica
Seita.1G121500 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10466971-10471970 Setaria italica
Seita.1G121500 5.0kb downstream 5.0kb downstream 5866 true scaffold_1: 10471971-10477836 Setaria italica
Seita.1G121500 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10472837-10477836 Setaria italica
Seita.1G121500 10.0kb upstream 10.0kb upstream 10866 true scaffold_1: 10461971-10472836 Setaria italica
Seita.1G121500 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10461971-10471970 Setaria italica
Seita.1G121500 10.0kb downstream 10.0kb downstream 10866 true scaffold_1: 10471971-10482836 Setaria italica
Seita.1G121500 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10472837-10482836 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121803791 5273 Angiosperm View MSA
122064483 5267 Panicoideae View MSA
124363862 5269 Grass View MSA
121074934 5274 Embryophyte View MSA
123114561 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.103     Low  
cufflinks 0.287       High
cufflinks 0.021     Low Low
cufflinks 0.115        
cufflinks 0.086        
cufflinks 0.123     Low  
cufflinks 0.013     Low Low
cufflinks 0.101     Low  
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086     Low  
cufflinks 0.544       High
cufflinks 0.191        
cufflinks 0.292       High
cufflinks 0.092     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076     Low  
cufflinks 0.13        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low

0 Strain