Gene : Seita.1G129400 S. italica v2.2
Defline:  (1 of 1) PTHR10880 - MORTALITY FACTOR 4-LIKE PROTEIN Genomic Order:  1294
Name:  ? Seita.1G129400 Secondary Identifier:  ? PAC:32698392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G129400 0.5kb upstream 0.5kb upstream 8294 true scaffold_1: 11755980-11764273 Setaria italica
Seita.1G129400 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11755980-11756479 Setaria italica
Seita.1G129400 0.5kb downstream 0.5kb downstream 8294 true scaffold_1: 11756480-11764773 Setaria italica
Seita.1G129400 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11764274-11764773 Setaria italica
Seita.1G129400 1.0kb upstream 1.0kb upstream 8794 true scaffold_1: 11755480-11764273 Setaria italica
Seita.1G129400 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11755480-11756479 Setaria italica
Seita.1G129400 1.0kb downstream 1.0kb downstream 8794 true scaffold_1: 11756480-11765273 Setaria italica
Seita.1G129400 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11764274-11765273 Setaria italica
Seita.1G129400 2.0kb upstream 2.0kb upstream 9794 true scaffold_1: 11754480-11764273 Setaria italica
Seita.1G129400 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11754480-11756479 Setaria italica
Seita.1G129400 2.0kb downstream 2.0kb downstream 9794 true scaffold_1: 11756480-11766273 Setaria italica
Seita.1G129400 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11764274-11766273 Setaria italica
Seita.1G129400 5.0kb upstream 5.0kb upstream 12794 true scaffold_1: 11751480-11764273 Setaria italica
Seita.1G129400 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11751480-11756479 Setaria italica
Seita.1G129400 5.0kb downstream 5.0kb downstream 12794 true scaffold_1: 11756480-11769273 Setaria italica
Seita.1G129400 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11764274-11769273 Setaria italica
Seita.1G129400 10.0kb upstream 10.0kb upstream 17794 true scaffold_1: 11746480-11764273 Setaria italica
Seita.1G129400 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11746480-11756479 Setaria italica
Seita.1G129400 10.0kb downstream 10.0kb downstream 17794 true scaffold_1: 11756480-11774273 Setaria italica
Seita.1G129400 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11764274-11774273 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189338 5267 Panicoideae View MSA
124583548 5269 Grass View MSA
122043270 5273 Angiosperm View MSA
121343861 5274 Embryophyte View MSA
123424392 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.373       High
cufflinks 6.076        
cufflinks 4.289        
cufflinks 4.732        
cufflinks 3.838       Low
cufflinks 6.483       High
cufflinks 4.936        
cufflinks 6.373       High
cufflinks 4.596        
cufflinks 4.28        
cufflinks 4.79        
cufflinks 5.217        
cufflinks 4.106        
cufflinks 3.337       Low
cufflinks 4.21        
cufflinks 6.428       High
cufflinks 5.377        
cufflinks 7.885       High
cufflinks 3.54       Low
cufflinks 4.705        

0 Strain