Gene : Seita.1G128400 S. italica v2.2
Defline:  (1 of 48) 2.7.10.1//2.7.11.1 - Receptor protein-tyrosine kinase / Receptor protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase Genomic Order:  1284
Name:  ? Seita.1G128400 Secondary Identifier:  ? PAC:32695826
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G128400 0.5kb upstream 0.5kb upstream 5626 true scaffold_1: 11540985-11546610 Setaria italica
Seita.1G128400 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11546111-11546610 Setaria italica
Seita.1G128400 0.5kb downstream 0.5kb downstream 5626 true scaffold_1: 11540485-11546110 Setaria italica
Seita.1G128400 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11540485-11540984 Setaria italica
Seita.1G128400 1.0kb upstream 1.0kb upstream 6126 true scaffold_1: 11540985-11547110 Setaria italica
Seita.1G128400 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11546111-11547110 Setaria italica
Seita.1G128400 1.0kb downstream 1.0kb downstream 6126 true scaffold_1: 11539985-11546110 Setaria italica
Seita.1G128400 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11539985-11540984 Setaria italica
Seita.1G128400 2.0kb upstream 2.0kb upstream 7126 true scaffold_1: 11540985-11548110 Setaria italica
Seita.1G128400 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11546111-11548110 Setaria italica
Seita.1G128400 2.0kb downstream 2.0kb downstream 7126 true scaffold_1: 11538985-11546110 Setaria italica
Seita.1G128400 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11538985-11540984 Setaria italica
Seita.1G128400 5.0kb upstream 5.0kb upstream 10126 true scaffold_1: 11540985-11551110 Setaria italica
Seita.1G128400 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11546111-11551110 Setaria italica
Seita.1G128400 5.0kb downstream 5.0kb downstream 10126 true scaffold_1: 11535985-11546110 Setaria italica
Seita.1G128400 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11535985-11540984 Setaria italica
Seita.1G128400 10.0kb upstream 10.0kb upstream 15126 true scaffold_1: 11540985-11556110 Setaria italica
Seita.1G128400 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11546111-11556110 Setaria italica
Seita.1G128400 10.0kb downstream 10.0kb downstream 15126 true scaffold_1: 11530985-11546110 Setaria italica
Seita.1G128400 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11530985-11540984 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179056 5267 Panicoideae View MSA
124577027 5269 Grass View MSA
122048436 5273 Angiosperm View MSA
121352410 5274 Embryophyte View MSA
123382754 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.043     High High
cufflinks 10.831        
cufflinks 15.876     High High
cufflinks 16.389     High High
cufflinks 11.938     High  
cufflinks 11.242        
cufflinks 9.759        
cufflinks 11.347        
cufflinks 8.36       Low
cufflinks 6.028       Low
cufflinks 11.507        
cufflinks 16.914     High High
cufflinks 13.236        
cufflinks 11.661        
cufflinks 15.1     High  
cufflinks 11.512        
cufflinks 13.755        
cufflinks 14.394     High  
cufflinks 11.619     High  
cufflinks 11.953        

0 Strain