Gene : Seita.1G140800 S. italica v2.2
Defline:  (1 of 2) PTHR11831:SF12 - RIBOSOMAL PROTEIN S4, MITOCHONDRIAL Genomic Order:  1408
Name:  ? Seita.1G140800 Secondary Identifier:  ? PAC:32694171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G140800 0.5kb upstream 0.5kb upstream 1704 true scaffold_1: 14672060-14673763 Setaria italica
Seita.1G140800 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14672060-14672559 Setaria italica
Seita.1G140800 0.5kb downstream 0.5kb downstream 1704 true scaffold_1: 14672560-14674263 Setaria italica
Seita.1G140800 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14673764-14674263 Setaria italica
Seita.1G140800 1.0kb upstream 1.0kb upstream 2204 true scaffold_1: 14671560-14673763 Setaria italica
Seita.1G140800 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14671560-14672559 Setaria italica
Seita.1G140800 1.0kb downstream 1.0kb downstream 2204 true scaffold_1: 14672560-14674763 Setaria italica
Seita.1G140800 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14673764-14674763 Setaria italica
Seita.1G140800 2.0kb upstream 2.0kb upstream 3204 true scaffold_1: 14670560-14673763 Setaria italica
Seita.1G140800 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14670560-14672559 Setaria italica
Seita.1G140800 2.0kb downstream 2.0kb downstream 3204 true scaffold_1: 14672560-14675763 Setaria italica
Seita.1G140800 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14673764-14675763 Setaria italica
Seita.1G140800 5.0kb upstream 5.0kb upstream 6204 true scaffold_1: 14667560-14673763 Setaria italica
Seita.1G140800 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14667560-14672559 Setaria italica
Seita.1G140800 5.0kb downstream 5.0kb downstream 6204 true scaffold_1: 14672560-14678763 Setaria italica
Seita.1G140800 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14673764-14678763 Setaria italica
Seita.1G140800 10.0kb upstream 10.0kb upstream 11204 true scaffold_1: 14662560-14673763 Setaria italica
Seita.1G140800 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14662560-14672559 Setaria italica
Seita.1G140800 10.0kb downstream 10.0kb downstream 11204 true scaffold_1: 14672560-14683763 Setaria italica
Seita.1G140800 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14673764-14683763 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026997 5273 Angiosperm View MSA
122191203 5267 Panicoideae View MSA
124466138 5269 Grass View MSA
121296723 5274 Embryophyte View MSA
123334843 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.031        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain