Gene : Seita.1G139100 S. italica v2.2
Defline:  (1 of 1) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  1391
Name:  ? Seita.1G139100 Secondary Identifier:  ? PAC:32697259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G139100 0.5kb upstream 0.5kb upstream 4471 true scaffold_1: 14424174-14428644 Setaria italica
Seita.1G139100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14424174-14424673 Setaria italica
Seita.1G139100 0.5kb downstream 0.5kb downstream 4471 true scaffold_1: 14424674-14429144 Setaria italica
Seita.1G139100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14428645-14429144 Setaria italica
Seita.1G139100 1.0kb upstream 1.0kb upstream 4971 true scaffold_1: 14423674-14428644 Setaria italica
Seita.1G139100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14423674-14424673 Setaria italica
Seita.1G139100 1.0kb downstream 1.0kb downstream 4971 true scaffold_1: 14424674-14429644 Setaria italica
Seita.1G139100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14428645-14429644 Setaria italica
Seita.1G139100 2.0kb upstream 2.0kb upstream 5971 true scaffold_1: 14422674-14428644 Setaria italica
Seita.1G139100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14422674-14424673 Setaria italica
Seita.1G139100 2.0kb downstream 2.0kb downstream 5971 true scaffold_1: 14424674-14430644 Setaria italica
Seita.1G139100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14428645-14430644 Setaria italica
Seita.1G139100 5.0kb upstream 5.0kb upstream 8971 true scaffold_1: 14419674-14428644 Setaria italica
Seita.1G139100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14419674-14424673 Setaria italica
Seita.1G139100 5.0kb downstream 5.0kb downstream 8971 true scaffold_1: 14424674-14433644 Setaria italica
Seita.1G139100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14428645-14433644 Setaria italica
Seita.1G139100 10.0kb upstream 10.0kb upstream 13971 true scaffold_1: 14414674-14428644 Setaria italica
Seita.1G139100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14414674-14424673 Setaria italica
Seita.1G139100 10.0kb downstream 10.0kb downstream 13971 true scaffold_1: 14424674-14438644 Setaria italica
Seita.1G139100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14428645-14438644 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184111 5267 Panicoideae View MSA
124578016 5269 Grass View MSA
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.674        
cufflinks 3.835        
cufflinks 5.911        
cufflinks 2.364        
cufflinks 5.171        
cufflinks 3.957        
cufflinks 9.013       High
cufflinks 14.816     High High
cufflinks 15.615     High High
cufflinks 3.311        
cufflinks 2.196        
cufflinks 0.619       Low
cufflinks 0.982       Low
cufflinks 10.478       High
cufflinks 0.839       Low
cufflinks 4.89        
cufflinks 0.763       Low
cufflinks 2.019        
cufflinks 2.662        
cufflinks 0.852       Low

0 Strain