Gene : Seita.1G156100 S. italica v2.2
Defline:  (1 of 2) PTHR11046 - OLIGORIBONUCLEASE, MITOCHONDRIAL Genomic Order:  1561
Name:  ? Seita.1G156100 Secondary Identifier:  ? PAC:32698168
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G156100 0.5kb upstream 0.5kb upstream 11794 true scaffold_1: 21592004-21603797 Setaria italica
Seita.1G156100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 21603298-21603797 Setaria italica
Seita.1G156100 0.5kb downstream 0.5kb downstream 11794 true scaffold_1: 21591504-21603297 Setaria italica
Seita.1G156100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 21591504-21592003 Setaria italica
Seita.1G156100 1.0kb upstream 1.0kb upstream 12294 true scaffold_1: 21592004-21604297 Setaria italica
Seita.1G156100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 21603298-21604297 Setaria italica
Seita.1G156100 1.0kb downstream 1.0kb downstream 12294 true scaffold_1: 21591004-21603297 Setaria italica
Seita.1G156100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 21591004-21592003 Setaria italica
Seita.1G156100 2.0kb upstream 2.0kb upstream 13294 true scaffold_1: 21592004-21605297 Setaria italica
Seita.1G156100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 21603298-21605297 Setaria italica
Seita.1G156100 2.0kb downstream 2.0kb downstream 13294 true scaffold_1: 21590004-21603297 Setaria italica
Seita.1G156100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 21590004-21592003 Setaria italica
Seita.1G156100 5.0kb upstream 5.0kb upstream 16294 true scaffold_1: 21592004-21608297 Setaria italica
Seita.1G156100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 21603298-21608297 Setaria italica
Seita.1G156100 5.0kb downstream 5.0kb downstream 16294 true scaffold_1: 21587004-21603297 Setaria italica
Seita.1G156100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 21587004-21592003 Setaria italica
Seita.1G156100 10.0kb upstream 10.0kb upstream 21294 true scaffold_1: 21592004-21613297 Setaria italica
Seita.1G156100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 21603298-21613297 Setaria italica
Seita.1G156100 10.0kb downstream 10.0kb downstream 21294 true scaffold_1: 21582004-21603297 Setaria italica
Seita.1G156100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 21582004-21592003 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190570 5267 Panicoideae View MSA
124571980 5269 Grass View MSA
122046409 5273 Angiosperm View MSA
121344784 5274 Embryophyte View MSA
123423966 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.446        
cufflinks 0.446        
cufflinks 0.547       High
cufflinks 0.386        
cufflinks 0.317       Low
cufflinks 0.524        
cufflinks 0.37        
cufflinks 0.417        
cufflinks 0.265       Low
cufflinks 0.407        
cufflinks 0.294       Low
cufflinks 0.645       High
cufflinks 0.518        
cufflinks 0.568       High
cufflinks 0.394        
cufflinks 0.417        
cufflinks 0.537        
cufflinks 0.43        
cufflinks 0.375        
cufflinks 0.484        

0 Strain