Gene : Seita.1G090700 S. italica v2.2
Genomic Order:  907 Name:  ? Seita.1G090700
Secondary Identifier:  ? PAC:32698383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G090700 0.5kb upstream 0.5kb upstream 3339 true scaffold_1: 7988462-7991800 Setaria italica
Seita.1G090700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7988462-7988961 Setaria italica
Seita.1G090700 0.5kb downstream 0.5kb downstream 3339 true scaffold_1: 7988962-7992300 Setaria italica
Seita.1G090700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7991801-7992300 Setaria italica
Seita.1G090700 1.0kb upstream 1.0kb upstream 3839 true scaffold_1: 7987962-7991800 Setaria italica
Seita.1G090700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7987962-7988961 Setaria italica
Seita.1G090700 1.0kb downstream 1.0kb downstream 3839 true scaffold_1: 7988962-7992800 Setaria italica
Seita.1G090700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7991801-7992800 Setaria italica
Seita.1G090700 2.0kb upstream 2.0kb upstream 4839 true scaffold_1: 7986962-7991800 Setaria italica
Seita.1G090700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7986962-7988961 Setaria italica
Seita.1G090700 2.0kb downstream 2.0kb downstream 4839 true scaffold_1: 7988962-7993800 Setaria italica
Seita.1G090700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7991801-7993800 Setaria italica
Seita.1G090700 5.0kb upstream 5.0kb upstream 7839 true scaffold_1: 7983962-7991800 Setaria italica
Seita.1G090700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7983962-7988961 Setaria italica
Seita.1G090700 5.0kb downstream 5.0kb downstream 7839 true scaffold_1: 7988962-7996800 Setaria italica
Seita.1G090700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7991801-7996800 Setaria italica
Seita.1G090700 10.0kb upstream 10.0kb upstream 12839 true scaffold_1: 7978962-7991800 Setaria italica
Seita.1G090700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7978962-7988961 Setaria italica
Seita.1G090700 10.0kb downstream 10.0kb downstream 12839 true scaffold_1: 7988962-8001800 Setaria italica
Seita.1G090700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7991801-8001800 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193809 5267 Panicoideae View MSA
124578723 5269 Grass View MSA
122044316 5273 Angiosperm View MSA
121310275 5274 Embryophyte View MSA
123347809 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.882        
cufflinks 3.58        
cufflinks 2.89       Low
cufflinks 3.55        
cufflinks 3.665        
cufflinks 3.782        
cufflinks 3.369        
cufflinks 3.733        
cufflinks 3.603        
cufflinks 5.138        
cufflinks 2.929       Low
cufflinks 5.319       High
cufflinks 4.365        
cufflinks 2.965       Low
cufflinks 3.147        
cufflinks 4.723        
cufflinks 4.177        
cufflinks 9.75       High
cufflinks 3.506        
cufflinks 3.221        

0 Strain