Gene : Seita.1G092800 S. italica v2.2
Genomic Order:  928 Name:  ? Seita.1G092800
Secondary Identifier:  ? PAC:32696063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G092800 0.5kb upstream 0.5kb upstream 1685 true scaffold_1: 8166760-8168444 Setaria italica
Seita.1G092800 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8167945-8168444 Setaria italica
Seita.1G092800 0.5kb downstream 0.5kb downstream 1685 true scaffold_1: 8166260-8167944 Setaria italica
Seita.1G092800 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8166260-8166759 Setaria italica
Seita.1G092800 1.0kb upstream 1.0kb upstream 2185 true scaffold_1: 8166760-8168944 Setaria italica
Seita.1G092800 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8167945-8168944 Setaria italica
Seita.1G092800 1.0kb downstream 1.0kb downstream 2185 true scaffold_1: 8165760-8167944 Setaria italica
Seita.1G092800 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8165760-8166759 Setaria italica
Seita.1G092800 2.0kb upstream 2.0kb upstream 3185 true scaffold_1: 8166760-8169944 Setaria italica
Seita.1G092800 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8167945-8169944 Setaria italica
Seita.1G092800 2.0kb downstream 2.0kb downstream 3185 true scaffold_1: 8164760-8167944 Setaria italica
Seita.1G092800 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8164760-8166759 Setaria italica
Seita.1G092800 5.0kb upstream 5.0kb upstream 6185 true scaffold_1: 8166760-8172944 Setaria italica
Seita.1G092800 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8167945-8172944 Setaria italica
Seita.1G092800 5.0kb downstream 5.0kb downstream 6185 true scaffold_1: 8161760-8167944 Setaria italica
Seita.1G092800 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8161760-8166759 Setaria italica
Seita.1G092800 10.0kb upstream 10.0kb upstream 11185 true scaffold_1: 8166760-8177944 Setaria italica
Seita.1G092800 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8167945-8177944 Setaria italica
Seita.1G092800 10.0kb downstream 10.0kb downstream 11185 true scaffold_1: 8156760-8167944 Setaria italica
Seita.1G092800 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8156760-8166759 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185840 5267 Panicoideae View MSA
124584919 5269 Grass View MSA
122051130 5273 Angiosperm View MSA
121349570 5274 Embryophyte View MSA
123425322 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.21        
cufflinks 0.168        
cufflinks 0.232        
cufflinks 0.277        
cufflinks 0.427        
cufflinks 0.044     Low Low
cufflinks 0.552        
cufflinks 0.404        
cufflinks 0.165        
cufflinks 0.445        
cufflinks 0.124     Low  
cufflinks 0.081     Low  
cufflinks 0.085     Low  
cufflinks 0.128        
cufflinks 0.057     Low  
cufflinks 5.121       High
cufflinks 0.017     Low Low
cufflinks 0.201        
cufflinks 4.051       High
cufflinks 0.087     Low  

0 Strain