Gene : Seita.1G093200 S. italica v2.2
Defline:  (1 of 3) 1.1.1.354 - Farnesol dehydrogenase (NAD(+)) / NAD(+)-farnesol dehydrogenase Genomic Order:  932
Name:  ? Seita.1G093200 Secondary Identifier:  ? PAC:32694936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G093200 0.5kb upstream 0.5kb upstream 4162 true scaffold_1: 8218410-8222571 Setaria italica
Seita.1G093200 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8222072-8222571 Setaria italica
Seita.1G093200 0.5kb downstream 0.5kb downstream 4162 true scaffold_1: 8217910-8222071 Setaria italica
Seita.1G093200 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8217910-8218409 Setaria italica
Seita.1G093200 1.0kb upstream 1.0kb upstream 4662 true scaffold_1: 8218410-8223071 Setaria italica
Seita.1G093200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8222072-8223071 Setaria italica
Seita.1G093200 1.0kb downstream 1.0kb downstream 4662 true scaffold_1: 8217410-8222071 Setaria italica
Seita.1G093200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8217410-8218409 Setaria italica
Seita.1G093200 2.0kb upstream 2.0kb upstream 5662 true scaffold_1: 8218410-8224071 Setaria italica
Seita.1G093200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8222072-8224071 Setaria italica
Seita.1G093200 2.0kb downstream 2.0kb downstream 5662 true scaffold_1: 8216410-8222071 Setaria italica
Seita.1G093200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8216410-8218409 Setaria italica
Seita.1G093200 5.0kb upstream 5.0kb upstream 8662 true scaffold_1: 8218410-8227071 Setaria italica
Seita.1G093200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8222072-8227071 Setaria italica
Seita.1G093200 5.0kb downstream 5.0kb downstream 8662 true scaffold_1: 8213410-8222071 Setaria italica
Seita.1G093200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8213410-8218409 Setaria italica
Seita.1G093200 10.0kb upstream 10.0kb upstream 13662 true scaffold_1: 8218410-8232071 Setaria italica
Seita.1G093200 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8222072-8232071 Setaria italica
Seita.1G093200 10.0kb downstream 10.0kb downstream 13662 true scaffold_1: 8208410-8222071 Setaria italica
Seita.1G093200 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8208410-8218409 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187015 5267 Panicoideae View MSA
124570149 5269 Grass View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low Low
cufflinks 1.568        
cufflinks 20.854     High  
cufflinks 32.295     High High
cufflinks 13.955     High  
cufflinks 0.12     Low  
cufflinks 7.549        
cufflinks 16.401     High  
cufflinks 2.336        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low Low
cufflinks 0.117     Low  
cufflinks 0.064     Low  
cufflinks 16.212     High  
cufflinks 0.059     Low Low
cufflinks 128.481     High High
cufflinks 0.082     Low  
cufflinks 0.645        
cufflinks 101.251     High High
cufflinks 0.023     Low Low

0 Strain