Gene : Seita.1G118700 S. italica v2.2
Defline:  (1 of 21) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  1187
Name:  ? Seita.1G118700 Secondary Identifier:  ? PAC:32694331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G118700 0.5kb upstream 0.5kb upstream 3735 true scaffold_1: 10295965-10299699 Setaria italica
Seita.1G118700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10295965-10296464 Setaria italica
Seita.1G118700 0.5kb downstream 0.5kb downstream 3735 true scaffold_1: 10296465-10300199 Setaria italica
Seita.1G118700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10299700-10300199 Setaria italica
Seita.1G118700 1.0kb upstream 1.0kb upstream 4235 true scaffold_1: 10295465-10299699 Setaria italica
Seita.1G118700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10295465-10296464 Setaria italica
Seita.1G118700 1.0kb downstream 1.0kb downstream 4235 true scaffold_1: 10296465-10300699 Setaria italica
Seita.1G118700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10299700-10300699 Setaria italica
Seita.1G118700 2.0kb upstream 2.0kb upstream 5235 true scaffold_1: 10294465-10299699 Setaria italica
Seita.1G118700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10294465-10296464 Setaria italica
Seita.1G118700 2.0kb downstream 2.0kb downstream 5235 true scaffold_1: 10296465-10301699 Setaria italica
Seita.1G118700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10299700-10301699 Setaria italica
Seita.1G118700 5.0kb upstream 5.0kb upstream 8235 true scaffold_1: 10291465-10299699 Setaria italica
Seita.1G118700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10291465-10296464 Setaria italica
Seita.1G118700 5.0kb downstream 5.0kb downstream 8235 true scaffold_1: 10296465-10304699 Setaria italica
Seita.1G118700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10299700-10304699 Setaria italica
Seita.1G118700 10.0kb upstream 10.0kb upstream 13235 true scaffold_1: 10286465-10299699 Setaria italica
Seita.1G118700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10286465-10296464 Setaria italica
Seita.1G118700 10.0kb downstream 10.0kb downstream 13235 true scaffold_1: 10296465-10309699 Setaria italica
Seita.1G118700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10299700-10309699 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175627 5267 Panicoideae View MSA
124574804 5269 Grass View MSA
122049282 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.449     High High
cufflinks 20.582     High High
cufflinks 0.673       Low
cufflinks 1.978        
cufflinks 5.1        
cufflinks 19.124     High High
cufflinks 11.765        
cufflinks 12.175        
cufflinks 12.69     High  
cufflinks 8.055        
cufflinks 12.496        
cufflinks 4.586        
cufflinks 6.006        
cufflinks 0.311       Low
cufflinks 5.429        
cufflinks 9.16        
cufflinks 4.906        
cufflinks 6.025        
cufflinks 0.857       Low
cufflinks 5.199        

0 Strain