Gene : Seita.1G202500 S. italica v2.2
Genomic Order:  2025 Name:  ? Seita.1G202500
Secondary Identifier:  ? PAC:32694612
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G202500 0.5kb upstream 0.5kb upstream 6264 true scaffold_1: 28237590-28243853 Setaria italica
Seita.1G202500 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 28237590-28238089 Setaria italica
Seita.1G202500 0.5kb downstream 0.5kb downstream 6264 true scaffold_1: 28238090-28244353 Setaria italica
Seita.1G202500 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 28243854-28244353 Setaria italica
Seita.1G202500 1.0kb upstream 1.0kb upstream 6764 true scaffold_1: 28237090-28243853 Setaria italica
Seita.1G202500 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 28237090-28238089 Setaria italica
Seita.1G202500 1.0kb downstream 1.0kb downstream 6764 true scaffold_1: 28238090-28244853 Setaria italica
Seita.1G202500 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 28243854-28244853 Setaria italica
Seita.1G202500 2.0kb upstream 2.0kb upstream 7764 true scaffold_1: 28236090-28243853 Setaria italica
Seita.1G202500 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 28236090-28238089 Setaria italica
Seita.1G202500 2.0kb downstream 2.0kb downstream 7764 true scaffold_1: 28238090-28245853 Setaria italica
Seita.1G202500 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 28243854-28245853 Setaria italica
Seita.1G202500 5.0kb upstream 5.0kb upstream 10764 true scaffold_1: 28233090-28243853 Setaria italica
Seita.1G202500 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 28233090-28238089 Setaria italica
Seita.1G202500 5.0kb downstream 5.0kb downstream 10764 true scaffold_1: 28238090-28248853 Setaria italica
Seita.1G202500 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 28243854-28248853 Setaria italica
Seita.1G202500 10.0kb upstream 10.0kb upstream 15764 true scaffold_1: 28228090-28243853 Setaria italica
Seita.1G202500 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 28228090-28238089 Setaria italica
Seita.1G202500 10.0kb downstream 10.0kb downstream 15764 true scaffold_1: 28238090-28253853 Setaria italica
Seita.1G202500 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 28243854-28253853 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180900 5267 Panicoideae View MSA
124579992 5269 Grass View MSA
122049773 5273 Angiosperm View MSA
121345275 5274 Embryophyte View MSA
123425777 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.524        
cufflinks 4.349        
cufflinks 3.242        
cufflinks 2.747       Low
cufflinks 3.258        
cufflinks 4.257        
cufflinks 4.09        
cufflinks 3.751        
cufflinks 4.038        
cufflinks 2.836       Low
cufflinks 3.643        
cufflinks 3.962        
cufflinks 3.03        
cufflinks 3.246        
cufflinks 4.017        
cufflinks 5.741       High
cufflinks 3.582        
cufflinks 8.825       High
cufflinks 3.081        
cufflinks 3.33        

0 Strain