Gene : Seita.1G203000 S. italica v2.2
Defline:  (1 of 1) PTHR10438:SF229 - THIOREDOXIN-LIKE 4, CHLOROPLASTIC Genomic Order:  2030
Name:  ? Seita.1G203000 Secondary Identifier:  ? PAC:32697735
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G203000 0.5kb upstream 0.5kb upstream 2237 true scaffold_1: 28258097-28260333 Setaria italica
Seita.1G203000 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 28259834-28260333 Setaria italica
Seita.1G203000 0.5kb downstream 0.5kb downstream 2237 true scaffold_1: 28257597-28259833 Setaria italica
Seita.1G203000 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 28257597-28258096 Setaria italica
Seita.1G203000 1.0kb upstream 1.0kb upstream 2737 true scaffold_1: 28258097-28260833 Setaria italica
Seita.1G203000 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 28259834-28260833 Setaria italica
Seita.1G203000 1.0kb downstream 1.0kb downstream 2737 true scaffold_1: 28257097-28259833 Setaria italica
Seita.1G203000 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 28257097-28258096 Setaria italica
Seita.1G203000 2.0kb upstream 2.0kb upstream 3737 true scaffold_1: 28258097-28261833 Setaria italica
Seita.1G203000 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 28259834-28261833 Setaria italica
Seita.1G203000 2.0kb downstream 2.0kb downstream 3737 true scaffold_1: 28256097-28259833 Setaria italica
Seita.1G203000 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 28256097-28258096 Setaria italica
Seita.1G203000 5.0kb upstream 5.0kb upstream 6737 true scaffold_1: 28258097-28264833 Setaria italica
Seita.1G203000 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 28259834-28264833 Setaria italica
Seita.1G203000 5.0kb downstream 5.0kb downstream 6737 true scaffold_1: 28253097-28259833 Setaria italica
Seita.1G203000 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 28253097-28258096 Setaria italica
Seita.1G203000 10.0kb upstream 10.0kb upstream 11737 true scaffold_1: 28258097-28269833 Setaria italica
Seita.1G203000 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 28259834-28269833 Setaria italica
Seita.1G203000 10.0kb downstream 10.0kb downstream 11737 true scaffold_1: 28248097-28259833 Setaria italica
Seita.1G203000 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 28248097-28258096 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175110 5267 Panicoideae View MSA
124578522 5269 Grass View MSA
122048480 5273 Angiosperm View MSA
121346716 5274 Embryophyte View MSA
123427646 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.663        
cufflinks 10.408        
cufflinks 127.901     High  
cufflinks 198.566     High High
cufflinks 157.203     High High
cufflinks 9.856        
cufflinks 54.949     High  
cufflinks 73.27     High  
cufflinks 43.581     High  
cufflinks 2.917        
cufflinks 2.48        
cufflinks 0.02     Low Low
cufflinks 0.575        
cufflinks 40.719     High  
cufflinks 0.028     Low Low
cufflinks 88.648     High  
cufflinks 0.033     Low Low
cufflinks 5.189        
cufflinks 205.524     High High
cufflinks 0.07     Low Low

0 Strain