Gene : Seita.1G167900 S. italica v2.2
Defline:  (1 of 1) PTHR10953:SF9 - UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 5 Genomic Order:  1679
Name:  ? Seita.1G167900 Secondary Identifier:  ? PAC:32695479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G167900 0.5kb upstream 0.5kb upstream 6074 true scaffold_1: 24021828-24027901 Setaria italica
Seita.1G167900 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 24021828-24022327 Setaria italica
Seita.1G167900 0.5kb downstream 0.5kb downstream 6074 true scaffold_1: 24022328-24028401 Setaria italica
Seita.1G167900 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 24027902-24028401 Setaria italica
Seita.1G167900 1.0kb upstream 1.0kb upstream 6574 true scaffold_1: 24021328-24027901 Setaria italica
Seita.1G167900 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 24021328-24022327 Setaria italica
Seita.1G167900 1.0kb downstream 1.0kb downstream 6574 true scaffold_1: 24022328-24028901 Setaria italica
Seita.1G167900 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 24027902-24028901 Setaria italica
Seita.1G167900 2.0kb upstream 2.0kb upstream 7574 true scaffold_1: 24020328-24027901 Setaria italica
Seita.1G167900 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 24020328-24022327 Setaria italica
Seita.1G167900 2.0kb downstream 2.0kb downstream 7574 true scaffold_1: 24022328-24029901 Setaria italica
Seita.1G167900 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 24027902-24029901 Setaria italica
Seita.1G167900 5.0kb upstream 5.0kb upstream 10574 true scaffold_1: 24017328-24027901 Setaria italica
Seita.1G167900 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 24017328-24022327 Setaria italica
Seita.1G167900 5.0kb downstream 5.0kb downstream 10574 true scaffold_1: 24022328-24032901 Setaria italica
Seita.1G167900 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 24027902-24032901 Setaria italica
Seita.1G167900 10.0kb upstream 10.0kb upstream 15574 true scaffold_1: 24012328-24027901 Setaria italica
Seita.1G167900 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 24012328-24022327 Setaria italica
Seita.1G167900 10.0kb downstream 10.0kb downstream 15574 true scaffold_1: 24022328-24037901 Setaria italica
Seita.1G167900 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 24027902-24037901 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175473 5267 Panicoideae View MSA
124579190 5269 Grass View MSA
122041922 5273 Angiosperm View MSA
121347564 5274 Embryophyte View MSA
123424275 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.72        
cufflinks 10.581        
cufflinks 4.334       Low
cufflinks 3.494       Low
cufflinks 3.993       Low
cufflinks 8.994        
cufflinks 6.45        
cufflinks 8.04        
cufflinks 6.62        
cufflinks 12.833       High
cufflinks 9.728        
cufflinks 8.146        
cufflinks 7.69        
cufflinks 9.828        
cufflinks 11.911       High
cufflinks 3.168       Low
cufflinks 9.573        
cufflinks 4.524       Low
cufflinks 6.034        
cufflinks 10.549        

0 Strain