Gene : Seita.1G294200 S. italica v2.2
Defline:  (1 of 1) PTHR22939:SF66 - PRO-APOPTOTIC SERINE PROTEASE NMA111 Genomic Order:  2942
Name:  ? Seita.1G294200 Secondary Identifier:  ? PAC:32696591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G294200 0.5kb upstream 0.5kb upstream 12511 true scaffold_1: 36190751-36203261 Setaria italica
Seita.1G294200 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36202762-36203261 Setaria italica
Seita.1G294200 0.5kb downstream 0.5kb downstream 12511 true scaffold_1: 36190251-36202761 Setaria italica
Seita.1G294200 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36190251-36190750 Setaria italica
Seita.1G294200 1.0kb upstream 1.0kb upstream 13011 true scaffold_1: 36190751-36203761 Setaria italica
Seita.1G294200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36202762-36203761 Setaria italica
Seita.1G294200 1.0kb downstream 1.0kb downstream 13011 true scaffold_1: 36189751-36202761 Setaria italica
Seita.1G294200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36189751-36190750 Setaria italica
Seita.1G294200 2.0kb upstream 2.0kb upstream 14011 true scaffold_1: 36190751-36204761 Setaria italica
Seita.1G294200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36202762-36204761 Setaria italica
Seita.1G294200 2.0kb downstream 2.0kb downstream 14011 true scaffold_1: 36188751-36202761 Setaria italica
Seita.1G294200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36188751-36190750 Setaria italica
Seita.1G294200 5.0kb upstream 5.0kb upstream 17011 true scaffold_1: 36190751-36207761 Setaria italica
Seita.1G294200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36202762-36207761 Setaria italica
Seita.1G294200 5.0kb downstream 5.0kb downstream 17011 true scaffold_1: 36185751-36202761 Setaria italica
Seita.1G294200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36185751-36190750 Setaria italica
Seita.1G294200 10.0kb upstream 10.0kb upstream 22011 true scaffold_1: 36190751-36212761 Setaria italica
Seita.1G294200 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36202762-36212761 Setaria italica
Seita.1G294200 10.0kb downstream 10.0kb downstream 22011 true scaffold_1: 36180751-36202761 Setaria italica
Seita.1G294200 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36180751-36190750 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198473 5267 Panicoideae View MSA
124585526 5269 Grass View MSA
122042652 5273 Angiosperm View MSA
121347619 5274 Embryophyte View MSA
123428262 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.553        
cufflinks 21.013     High High
cufflinks 25.945     High High
cufflinks 18.802     High  
cufflinks 16.811     High  
cufflinks 22.232     High High
cufflinks 11.455        
cufflinks 13.758     High  
cufflinks 14.432     High  
cufflinks 6.972       Low
cufflinks 12.752        
cufflinks 12.931        
cufflinks 13.707     High  
cufflinks 23.428     High High
cufflinks 14.45     High  
cufflinks 12.349     High  
cufflinks 13.296        
cufflinks 11.414     High  
cufflinks 14.048     High  
cufflinks 14.301        

0 Strain