Gene : Seita.1G316700 S. italica v2.2
Defline:  (1 of 1) PTHR24072:SF149 - RAC-LIKE GTP-BINDING PROTEIN ARAC10-RELATED Genomic Order:  3167
Name:  ? Seita.1G316700 Secondary Identifier:  ? PAC:32696477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G316700 0.5kb upstream 0.5kb upstream 3591 true scaffold_1: 37729012-37732602 Setaria italica
Seita.1G316700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37732103-37732602 Setaria italica
Seita.1G316700 0.5kb downstream 0.5kb downstream 3591 true scaffold_1: 37728512-37732102 Setaria italica
Seita.1G316700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37728512-37729011 Setaria italica
Seita.1G316700 1.0kb upstream 1.0kb upstream 4091 true scaffold_1: 37729012-37733102 Setaria italica
Seita.1G316700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37732103-37733102 Setaria italica
Seita.1G316700 1.0kb downstream 1.0kb downstream 4091 true scaffold_1: 37728012-37732102 Setaria italica
Seita.1G316700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37728012-37729011 Setaria italica
Seita.1G316700 2.0kb upstream 2.0kb upstream 5091 true scaffold_1: 37729012-37734102 Setaria italica
Seita.1G316700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37732103-37734102 Setaria italica
Seita.1G316700 2.0kb downstream 2.0kb downstream 5091 true scaffold_1: 37727012-37732102 Setaria italica
Seita.1G316700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37727012-37729011 Setaria italica
Seita.1G316700 5.0kb upstream 5.0kb upstream 8091 true scaffold_1: 37729012-37737102 Setaria italica
Seita.1G316700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37732103-37737102 Setaria italica
Seita.1G316700 5.0kb downstream 5.0kb downstream 8091 true scaffold_1: 37724012-37732102 Setaria italica
Seita.1G316700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37724012-37729011 Setaria italica
Seita.1G316700 10.0kb upstream 10.0kb upstream 13091 true scaffold_1: 37729012-37742102 Setaria italica
Seita.1G316700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37732103-37742102 Setaria italica
Seita.1G316700 10.0kb downstream 10.0kb downstream 13091 true scaffold_1: 37719012-37732102 Setaria italica
Seita.1G316700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37719012-37729011 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184994 5267 Panicoideae View MSA
124586777 5269 Grass View MSA
122043872 5273 Angiosperm View MSA
121310204 5274 Embryophyte View MSA
123426845 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.877     High  
cufflinks 29.269     High High
cufflinks 8.043       Low
cufflinks 7.366       Low
cufflinks 10.205        
cufflinks 29.253     High High
cufflinks 13.096        
cufflinks 14.897     High  
cufflinks 20.684     High  
cufflinks 18.685     High  
cufflinks 17.641     High  
cufflinks 18.826     High  
cufflinks 38.497     High High
cufflinks 9.56       Low
cufflinks 25.536     High  
cufflinks 12.809     High  
cufflinks 24.393     High  
cufflinks 9.649        
cufflinks 6.752       Low
cufflinks 22.375     High  

0 Strain