Gene : Seita.1G283000 S. italica v2.2
Defline:  (1 of 247) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  2830
Name:  ? Seita.1G283000 Secondary Identifier:  ? PAC:32697732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G283000 0.5kb upstream 0.5kb upstream 5903 true scaffold_1: 35343247-35349149 Setaria italica
Seita.1G283000 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35343247-35343746 Setaria italica
Seita.1G283000 0.5kb downstream 0.5kb downstream 5903 true scaffold_1: 35343747-35349649 Setaria italica
Seita.1G283000 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35349150-35349649 Setaria italica
Seita.1G283000 1.0kb upstream 1.0kb upstream 6403 true scaffold_1: 35342747-35349149 Setaria italica
Seita.1G283000 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35342747-35343746 Setaria italica
Seita.1G283000 1.0kb downstream 1.0kb downstream 6403 true scaffold_1: 35343747-35350149 Setaria italica
Seita.1G283000 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35349150-35350149 Setaria italica
Seita.1G283000 2.0kb upstream 2.0kb upstream 7403 true scaffold_1: 35341747-35349149 Setaria italica
Seita.1G283000 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35341747-35343746 Setaria italica
Seita.1G283000 2.0kb downstream 2.0kb downstream 7403 true scaffold_1: 35343747-35351149 Setaria italica
Seita.1G283000 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35349150-35351149 Setaria italica
Seita.1G283000 5.0kb upstream 5.0kb upstream 10403 true scaffold_1: 35338747-35349149 Setaria italica
Seita.1G283000 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35338747-35343746 Setaria italica
Seita.1G283000 5.0kb downstream 5.0kb downstream 10403 true scaffold_1: 35343747-35354149 Setaria italica
Seita.1G283000 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35349150-35354149 Setaria italica
Seita.1G283000 10.0kb upstream 10.0kb upstream 15403 true scaffold_1: 35333747-35349149 Setaria italica
Seita.1G283000 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35333747-35343746 Setaria italica
Seita.1G283000 10.0kb downstream 10.0kb downstream 15403 true scaffold_1: 35343747-35359149 Setaria italica
Seita.1G283000 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35349150-35359149 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175107 5267 Panicoideae View MSA
124586109 5269 Grass View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.814        
cufflinks 2.107        
cufflinks 0.207       Low
cufflinks 0.08     Low Low
cufflinks 0.048     Low Low
cufflinks 2.61        
cufflinks 0.884        
cufflinks 1.098        
cufflinks 0.292        
cufflinks 2.552        
cufflinks 1.544        
cufflinks 1.567        
cufflinks 0.782        
cufflinks 0.462        
cufflinks 4.459       High
cufflinks 0.744        
cufflinks 2.599        
cufflinks 0.375        
cufflinks 0.235        
cufflinks 3.052       High

0 Strain