Gene : Seita.1G369800 S. italica v2.2
Defline:  (1 of 1) 1.14.99.29 - Deoxyhypusine monooxygenase / DOHH Genomic Order:  3698
Name:  ? Seita.1G369800 Secondary Identifier:  ? PAC:32694952
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-5905 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G369800 0.5kb upstream 0.5kb upstream 3747 true scaffold_1: 41578022-41581768 Setaria italica
Seita.1G369800 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 41581269-41581768 Setaria italica
Seita.1G369800 0.5kb downstream 0.5kb downstream 3747 true scaffold_1: 41577522-41581268 Setaria italica
Seita.1G369800 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 41577522-41578021 Setaria italica
Seita.1G369800 1.0kb upstream 1.0kb upstream 4247 true scaffold_1: 41578022-41582268 Setaria italica
Seita.1G369800 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 41581269-41582268 Setaria italica
Seita.1G369800 1.0kb downstream 1.0kb downstream 4247 true scaffold_1: 41577022-41581268 Setaria italica
Seita.1G369800 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 41577022-41578021 Setaria italica
Seita.1G369800 2.0kb upstream 2.0kb upstream 5247 true scaffold_1: 41578022-41583268 Setaria italica
Seita.1G369800 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 41581269-41583268 Setaria italica
Seita.1G369800 2.0kb downstream 2.0kb downstream 5247 true scaffold_1: 41576022-41581268 Setaria italica
Seita.1G369800 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 41576022-41578021 Setaria italica
Seita.1G369800 5.0kb upstream 5.0kb upstream 8247 true scaffold_1: 41578022-41586268 Setaria italica
Seita.1G369800 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 41581269-41586268 Setaria italica
Seita.1G369800 5.0kb downstream 5.0kb downstream 8247 true scaffold_1: 41573022-41581268 Setaria italica
Seita.1G369800 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 41573022-41578021 Setaria italica
Seita.1G369800 10.0kb upstream 10.0kb upstream 13247 true scaffold_1: 41578022-41591268 Setaria italica
Seita.1G369800 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 41581269-41591268 Setaria italica
Seita.1G369800 10.0kb downstream 10.0kb downstream 13247 true scaffold_1: 41568022-41581268 Setaria italica
Seita.1G369800 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 41568022-41578021 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183643 5267 Panicoideae View MSA
124573360 5269 Grass View MSA
122045074 5273 Angiosperm View MSA
121346914 5274 Embryophyte View MSA
123424713 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.409        
cufflinks 4.581        
cufflinks 6.157        
cufflinks 7.262        
cufflinks 6.515        
cufflinks 3.559       Low
cufflinks 3.605       Low
cufflinks 7.215        
cufflinks 6.131        
cufflinks 7.429        
cufflinks 6.252        
cufflinks 6.596        
cufflinks 8.968       High
cufflinks 7.912        
cufflinks 7.775        
cufflinks 2.608       Low
cufflinks 7.715        
cufflinks 4.694        
cufflinks 7.766        
cufflinks 6.173        

0 Strain