Gene : Seita.1G378100 S. italica v2.2
Defline:  (1 of 1) PF14222 - Cell morphogenesis N-terminal (MOR2-PAG1_N) Genomic Order:  3781
Name:  ? Seita.1G378100 Secondary Identifier:  ? PAC:32697487
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G378100 0.5kb upstream 0.5kb upstream 11987 true scaffold_1: 41963708-41975694 Setaria italica
Seita.1G378100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 41963708-41964207 Setaria italica
Seita.1G378100 0.5kb downstream 0.5kb downstream 11987 true scaffold_1: 41964208-41976194 Setaria italica
Seita.1G378100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 41975695-41976194 Setaria italica
Seita.1G378100 1.0kb upstream 1.0kb upstream 12487 true scaffold_1: 41963208-41975694 Setaria italica
Seita.1G378100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 41963208-41964207 Setaria italica
Seita.1G378100 1.0kb downstream 1.0kb downstream 12487 true scaffold_1: 41964208-41976694 Setaria italica
Seita.1G378100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 41975695-41976694 Setaria italica
Seita.1G378100 2.0kb upstream 2.0kb upstream 13487 true scaffold_1: 41962208-41975694 Setaria italica
Seita.1G378100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 41962208-41964207 Setaria italica
Seita.1G378100 2.0kb downstream 2.0kb downstream 13487 true scaffold_1: 41964208-41977694 Setaria italica
Seita.1G378100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 41975695-41977694 Setaria italica
Seita.1G378100 5.0kb upstream 5.0kb upstream 16487 true scaffold_1: 41959208-41975694 Setaria italica
Seita.1G378100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 41959208-41964207 Setaria italica
Seita.1G378100 5.0kb downstream 5.0kb downstream 16487 true scaffold_1: 41964208-41980694 Setaria italica
Seita.1G378100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 41975695-41980694 Setaria italica
Seita.1G378100 10.0kb upstream 10.0kb upstream 21487 true scaffold_1: 41954208-41975694 Setaria italica
Seita.1G378100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 41954208-41964207 Setaria italica
Seita.1G378100 10.0kb downstream 10.0kb downstream 21487 true scaffold_1: 41964208-41985694 Setaria italica
Seita.1G378100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 41975695-41985694 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190413 5267 Panicoideae View MSA
124583629 5269 Grass View MSA
122041794 5273 Angiosperm View MSA
121348585 5274 Embryophyte View MSA
123424247 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.869       High
cufflinks 6.861        
cufflinks 8.531       High
cufflinks 6.416        
cufflinks 6.147        
cufflinks 6.64        
cufflinks 6.75        
cufflinks 3.818       Low
cufflinks 5.052        
cufflinks 3.68       Low
cufflinks 7.167        
cufflinks 4.743        
cufflinks 5.836        
cufflinks 5.895        
cufflinks 6.347        
cufflinks 8.471       High
cufflinks 3.778       Low
cufflinks 9.003       High
cufflinks 5.226        
cufflinks 4.901        

0 Strain