Gene : Seita.J007400 S. italica v2.2
Genomic Order:  17 Name:  ? Seita.J007400
Secondary Identifier:  ? PAC:32701653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.J007400 0.5kb upstream 0.5kb upstream 779 true scaffold_12: 121977-122755 Setaria italica
Seita.J007400 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 122256-122755 Setaria italica
Seita.J007400 0.5kb downstream 0.5kb downstream 779 true scaffold_12: 121477-122255 Setaria italica
Seita.J007400 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 121477-121976 Setaria italica
Seita.J007400 1.0kb upstream 1.0kb upstream 1279 true scaffold_12: 121977-123255 Setaria italica
Seita.J007400 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 122256-123255 Setaria italica
Seita.J007400 1.0kb downstream 1.0kb downstream 1279 true scaffold_12: 120977-122255 Setaria italica
Seita.J007400 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 120977-121976 Setaria italica
Seita.J007400 2.0kb upstream 2.0kb upstream 2279 true scaffold_12: 121977-124255 Setaria italica
Seita.J007400 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 122256-124255 Setaria italica
Seita.J007400 2.0kb downstream 2.0kb downstream 2279 true scaffold_12: 119977-122255 Setaria italica
Seita.J007400 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 119977-121976 Setaria italica
Seita.J007400 5.0kb upstream 5.0kb upstream 5279 true scaffold_12: 121977-127255 Setaria italica
Seita.J007400 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 122256-127255 Setaria italica
Seita.J007400 5.0kb downstream 5.0kb downstream 5279 true scaffold_12: 116977-122255 Setaria italica
Seita.J007400 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 116977-121976 Setaria italica
Seita.J007400 10.0kb upstream 10.0kb upstream 10279 true scaffold_12: 121977-132255 Setaria italica
Seita.J007400 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 122256-132255 Setaria italica
Seita.J007400 10.0kb downstream 10.0kb downstream 10279 true scaffold_12: 111977-122255 Setaria italica
Seita.J007400 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 111977-121976 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175517 5267 Panicoideae View MSA
124588730 5269 Grass View MSA
122048503 5273 Angiosperm View MSA
121310988 5274 Embryophyte View MSA
123348349 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.061     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.6       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.217        
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.235        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low Low

0 Strain