Gene : Seita.J012700 S. italica v2.2
Defline:  (1 of 2) PF00796 - Photosystem I reaction centre subunit VIII (PSI_8) Genomic Order:  1
Name:  ? Seita.J012700 Secondary Identifier:  ? PAC:32706062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.J012700 0.5kb upstream 0.5kb upstream 434 true scaffold_14: 1-434 Setaria italica
Seita.J012700 0.5kb upstream 0.5kb upstream 323 false scaffold_14: 1-323 Setaria italica
Seita.J012700 0.5kb downstream 0.5kb downstream 611 true scaffold_14: 324-934 Setaria italica
Seita.J012700 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 435-934 Setaria italica
Seita.J012700 1.0kb upstream 1.0kb upstream 434 true scaffold_14: 1-434 Setaria italica
Seita.J012700 1.0kb upstream 1.0kb upstream 323 false scaffold_14: 1-323 Setaria italica
Seita.J012700 1.0kb downstream 1.0kb downstream 1111 true scaffold_14: 324-1434 Setaria italica
Seita.J012700 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 435-1434 Setaria italica
Seita.J012700 2.0kb upstream 2.0kb upstream 434 true scaffold_14: 1-434 Setaria italica
Seita.J012700 2.0kb upstream 2.0kb upstream 323 false scaffold_14: 1-323 Setaria italica
Seita.J012700 2.0kb downstream 2.0kb downstream 2111 true scaffold_14: 324-2434 Setaria italica
Seita.J012700 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 435-2434 Setaria italica
Seita.J012700 5.0kb upstream 5.0kb upstream 434 true scaffold_14: 1-434 Setaria italica
Seita.J012700 5.0kb upstream 5.0kb upstream 323 false scaffold_14: 1-323 Setaria italica
Seita.J012700 5.0kb downstream 5.0kb downstream 5111 true scaffold_14: 324-5434 Setaria italica
Seita.J012700 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 435-5434 Setaria italica
Seita.J012700 10.0kb upstream 10.0kb upstream 434 true scaffold_14: 1-434 Setaria italica
Seita.J012700 10.0kb upstream 10.0kb upstream 323 false scaffold_14: 1-323 Setaria italica
Seita.J012700 10.0kb downstream 10.0kb downstream 10111 true scaffold_14: 324-10434 Setaria italica
Seita.J012700 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 435-10434 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029208 5273 Angiosperm View MSA
122176555 5267 Panicoideae View MSA
124590932 5269 Grass View MSA
121298578 5274 Embryophyte View MSA
123336542 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain