Gene : Seita.J020600 S. italica v2.2
Defline:  (1 of 1) PTHR13822:SF8 - ATP SYNTHASE EPSILON CHAIN, CHLOROPLASTIC Genomic Order:  80
Name:  ? Seita.J020600 Secondary Identifier:  ? PAC:32706128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.J020600 0.5kb upstream 0.5kb upstream 914 true scaffold_14: 134534-135447 Setaria italica
Seita.J020600 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 134948-135447 Setaria italica
Seita.J020600 0.5kb downstream 0.5kb downstream 914 true scaffold_14: 134034-134947 Setaria italica
Seita.J020600 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 134034-134533 Setaria italica
Seita.J020600 1.0kb upstream 1.0kb upstream 1414 true scaffold_14: 134534-135947 Setaria italica
Seita.J020600 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 134948-135947 Setaria italica
Seita.J020600 1.0kb downstream 1.0kb downstream 1414 true scaffold_14: 133534-134947 Setaria italica
Seita.J020600 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 133534-134533 Setaria italica
Seita.J020600 2.0kb upstream 2.0kb upstream 2414 true scaffold_14: 134534-136947 Setaria italica
Seita.J020600 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 134948-136947 Setaria italica
Seita.J020600 2.0kb downstream 2.0kb downstream 2414 true scaffold_14: 132534-134947 Setaria italica
Seita.J020600 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 132534-134533 Setaria italica
Seita.J020600 5.0kb upstream 5.0kb upstream 5414 true scaffold_14: 134534-139947 Setaria italica
Seita.J020600 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 134948-139947 Setaria italica
Seita.J020600 5.0kb downstream 5.0kb downstream 5414 true scaffold_14: 129534-134947 Setaria italica
Seita.J020600 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 129534-134533 Setaria italica
Seita.J020600 10.0kb upstream 10.0kb upstream 10414 true scaffold_14: 134534-144947 Setaria italica
Seita.J020600 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 134948-144947 Setaria italica
Seita.J020600 10.0kb downstream 10.0kb downstream 10414 true scaffold_14: 124534-134947 Setaria italica
Seita.J020600 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 124534-134533 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122116120 5267 Panicoideae View MSA
124588295 5269 Grass View MSA
122043419 5273 Angiosperm View MSA
121310118 5274 Embryophyte View MSA
123347694 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.496        
cufflinks 0.186        
cufflinks 2.546        
cufflinks 2.018        
cufflinks 2.513        
cufflinks 0.362        
cufflinks 1.148        
cufflinks 1.183        
cufflinks 2.297        
cufflinks 59.574     High High
cufflinks 2.343        
cufflinks 0.076     Low Low
cufflinks 0.568        
cufflinks 1.211        
cufflinks 0.151       Low
cufflinks 1.663        
cufflinks 0.138       Low
cufflinks 1.549        
cufflinks 2.046        
cufflinks 0.043     Low Low

0 Strain