Gene : Seita.2G049100 S. italica v2.2
Defline:  (1 of 1) PTHR10217//PTHR10217:SF526 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Genomic Order:  491
Name:  ? Seita.2G049100 Secondary Identifier:  ? PAC:32722750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G049100 0.5kb upstream 0.5kb upstream 4057 true scaffold_2: 3916417-3920473 Setaria italica
Seita.2G049100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3916417-3916916 Setaria italica
Seita.2G049100 0.5kb downstream 0.5kb downstream 4057 true scaffold_2: 3916917-3920973 Setaria italica
Seita.2G049100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3920474-3920973 Setaria italica
Seita.2G049100 1.0kb upstream 1.0kb upstream 4557 true scaffold_2: 3915917-3920473 Setaria italica
Seita.2G049100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3915917-3916916 Setaria italica
Seita.2G049100 1.0kb downstream 1.0kb downstream 4557 true scaffold_2: 3916917-3921473 Setaria italica
Seita.2G049100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3920474-3921473 Setaria italica
Seita.2G049100 2.0kb upstream 2.0kb upstream 5557 true scaffold_2: 3914917-3920473 Setaria italica
Seita.2G049100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3914917-3916916 Setaria italica
Seita.2G049100 2.0kb downstream 2.0kb downstream 5557 true scaffold_2: 3916917-3922473 Setaria italica
Seita.2G049100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3920474-3922473 Setaria italica
Seita.2G049100 5.0kb upstream 5.0kb upstream 8557 true scaffold_2: 3911917-3920473 Setaria italica
Seita.2G049100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3911917-3916916 Setaria italica
Seita.2G049100 5.0kb downstream 5.0kb downstream 8557 true scaffold_2: 3916917-3925473 Setaria italica
Seita.2G049100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3920474-3925473 Setaria italica
Seita.2G049100 10.0kb upstream 10.0kb upstream 13557 true scaffold_2: 3906917-3920473 Setaria italica
Seita.2G049100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3906917-3916916 Setaria italica
Seita.2G049100 10.0kb downstream 10.0kb downstream 13557 true scaffold_2: 3916917-3930473 Setaria italica
Seita.2G049100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3920474-3930473 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993642 5273 Angiosperm View MSA
122183337 5267 Panicoideae View MSA
124580619 5269 Grass View MSA
121263904 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low High
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain