Gene : Seita.2G061000 S. italica v2.2
Defline:  (1 of 1) PTHR19378//PTHR19378:SF4 - GOLGIN- RELATED Genomic Order:  610
Name:  ? Seita.2G061000 Secondary Identifier:  ? PAC:32719996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G061000 0.5kb upstream 0.5kb upstream 8308 true scaffold_2: 5091854-5100161 Setaria italica
Seita.2G061000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5091854-5092353 Setaria italica
Seita.2G061000 0.5kb downstream 0.5kb downstream 8308 true scaffold_2: 5092354-5100661 Setaria italica
Seita.2G061000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5100162-5100661 Setaria italica
Seita.2G061000 1.0kb upstream 1.0kb upstream 8808 true scaffold_2: 5091354-5100161 Setaria italica
Seita.2G061000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5091354-5092353 Setaria italica
Seita.2G061000 1.0kb downstream 1.0kb downstream 8808 true scaffold_2: 5092354-5101161 Setaria italica
Seita.2G061000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5100162-5101161 Setaria italica
Seita.2G061000 2.0kb upstream 2.0kb upstream 9808 true scaffold_2: 5090354-5100161 Setaria italica
Seita.2G061000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5090354-5092353 Setaria italica
Seita.2G061000 2.0kb downstream 2.0kb downstream 9808 true scaffold_2: 5092354-5102161 Setaria italica
Seita.2G061000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5100162-5102161 Setaria italica
Seita.2G061000 5.0kb upstream 5.0kb upstream 12808 true scaffold_2: 5087354-5100161 Setaria italica
Seita.2G061000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5087354-5092353 Setaria italica
Seita.2G061000 5.0kb downstream 5.0kb downstream 12808 true scaffold_2: 5092354-5105161 Setaria italica
Seita.2G061000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5100162-5105161 Setaria italica
Seita.2G061000 10.0kb upstream 10.0kb upstream 17808 true scaffold_2: 5082354-5100161 Setaria italica
Seita.2G061000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5082354-5092353 Setaria italica
Seita.2G061000 10.0kb downstream 10.0kb downstream 17808 true scaffold_2: 5092354-5110161 Setaria italica
Seita.2G061000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5100162-5110161 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184456 5267 Panicoideae View MSA
124571058 5269 Grass View MSA
122046057 5273 Angiosperm View MSA
121345822 5274 Embryophyte View MSA
123380274 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.061     Low  
cufflinks 0.182        
cufflinks 0.186        
cufflinks 0.102        
cufflinks 0.096     Low  
cufflinks 0.038     Low  
cufflinks 0.1     Low  
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.081     Low  
cufflinks 0.249       High
cufflinks 0.097     Low  
cufflinks 0.201       High
cufflinks 0.021     Low  
cufflinks 0.124     Low  
cufflinks 0.006     Low Low
cufflinks 0.115        
cufflinks 0.097     Low  

0 Strain