Gene : Seita.2G068600 S. italica v2.2
Defline:  (1 of 1) PTHR24093:SF264 - ATPASE 4, PLASMA MEMBRANE-TYPE Genomic Order:  686
Name:  ? Seita.2G068600 Secondary Identifier:  ? PAC:32718826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G068600 0.5kb upstream 0.5kb upstream 6512 true scaffold_2: 5721047-5727558 Setaria italica
Seita.2G068600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5721047-5721546 Setaria italica
Seita.2G068600 0.5kb downstream 0.5kb downstream 6512 true scaffold_2: 5721547-5728058 Setaria italica
Seita.2G068600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5727559-5728058 Setaria italica
Seita.2G068600 1.0kb upstream 1.0kb upstream 7012 true scaffold_2: 5720547-5727558 Setaria italica
Seita.2G068600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5720547-5721546 Setaria italica
Seita.2G068600 1.0kb downstream 1.0kb downstream 7012 true scaffold_2: 5721547-5728558 Setaria italica
Seita.2G068600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5727559-5728558 Setaria italica
Seita.2G068600 2.0kb upstream 2.0kb upstream 8012 true scaffold_2: 5719547-5727558 Setaria italica
Seita.2G068600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5719547-5721546 Setaria italica
Seita.2G068600 2.0kb downstream 2.0kb downstream 8012 true scaffold_2: 5721547-5729558 Setaria italica
Seita.2G068600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5727559-5729558 Setaria italica
Seita.2G068600 5.0kb upstream 5.0kb upstream 11012 true scaffold_2: 5716547-5727558 Setaria italica
Seita.2G068600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5716547-5721546 Setaria italica
Seita.2G068600 5.0kb downstream 5.0kb downstream 11012 true scaffold_2: 5721547-5732558 Setaria italica
Seita.2G068600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5727559-5732558 Setaria italica
Seita.2G068600 10.0kb upstream 10.0kb upstream 16012 true scaffold_2: 5711547-5727558 Setaria italica
Seita.2G068600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5711547-5721546 Setaria italica
Seita.2G068600 10.0kb downstream 10.0kb downstream 16012 true scaffold_2: 5721547-5737558 Setaria italica
Seita.2G068600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5727559-5737558 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188127 5267 Panicoideae View MSA
124588764 5269 Grass View MSA
122044728 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.372     High Low
cufflinks 62.876     High  
cufflinks 78.296     High  
cufflinks 70.976     High  
cufflinks 119.149     High High
cufflinks 76.403     High  
cufflinks 154.131     High High
cufflinks 62.795     High  
cufflinks 109.337     High  
cufflinks 14.003       Low
cufflinks 29.116     High Low
cufflinks 128.213     High High
cufflinks 42.389     High  
cufflinks 75.624     High  
cufflinks 100.316     High  
cufflinks 73.33     High  
cufflinks 66.083     High  
cufflinks 15.458     High Low
cufflinks 90.351     High  
cufflinks 56.672     High  

0 Strain