Gene : Seita.2G076200 S. italica v2.2
Defline:  (1 of 2) PTHR10261 - COATOMER SUBUNIT GAMMA Genomic Order:  762
Name:  ? Seita.2G076200 Secondary Identifier:  ? PAC:32721145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G076200 0.5kb upstream 0.5kb upstream 8129 true scaffold_2: 6361660-6369788 Setaria italica
Seita.2G076200 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6361660-6362159 Setaria italica
Seita.2G076200 0.5kb downstream 0.5kb downstream 8129 true scaffold_2: 6362160-6370288 Setaria italica
Seita.2G076200 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6369789-6370288 Setaria italica
Seita.2G076200 1.0kb upstream 1.0kb upstream 8629 true scaffold_2: 6361160-6369788 Setaria italica
Seita.2G076200 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6361160-6362159 Setaria italica
Seita.2G076200 1.0kb downstream 1.0kb downstream 8629 true scaffold_2: 6362160-6370788 Setaria italica
Seita.2G076200 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6369789-6370788 Setaria italica
Seita.2G076200 2.0kb upstream 2.0kb upstream 9629 true scaffold_2: 6360160-6369788 Setaria italica
Seita.2G076200 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6360160-6362159 Setaria italica
Seita.2G076200 2.0kb downstream 2.0kb downstream 9629 true scaffold_2: 6362160-6371788 Setaria italica
Seita.2G076200 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6369789-6371788 Setaria italica
Seita.2G076200 5.0kb upstream 5.0kb upstream 12629 true scaffold_2: 6357160-6369788 Setaria italica
Seita.2G076200 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6357160-6362159 Setaria italica
Seita.2G076200 5.0kb downstream 5.0kb downstream 12629 true scaffold_2: 6362160-6374788 Setaria italica
Seita.2G076200 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6369789-6374788 Setaria italica
Seita.2G076200 10.0kb upstream 10.0kb upstream 17629 true scaffold_2: 6352160-6369788 Setaria italica
Seita.2G076200 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6352160-6362159 Setaria italica
Seita.2G076200 10.0kb downstream 10.0kb downstream 17629 true scaffold_2: 6362160-6379788 Setaria italica
Seita.2G076200 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6369789-6379788 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184050 5267 Panicoideae View MSA
124575108 5269 Grass View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.037     High  
cufflinks 59.532     High High
cufflinks 24.764     High  
cufflinks 17.884     High Low
cufflinks 19.151     High Low
cufflinks 54.084     High High
cufflinks 40.682     High  
cufflinks 35.135     High  
cufflinks 37.106     High  
cufflinks 25.632     High  
cufflinks 54.983     High High
cufflinks 45.288     High  
cufflinks 36.27     High  
cufflinks 27.127     High  
cufflinks 64.371     High High
cufflinks 24.701     High  
cufflinks 45.502     High  
cufflinks 23.771     High Low
cufflinks 25.688     High  
cufflinks 61.722     High High

0 Strain