Gene : Seita.2G086200 S. italica v2.2
Defline:  (1 of 1) PTHR32195:SF12 - TYROSINE-SPECIFIC TRANSPORT PROTEIN-RELATED Genomic Order:  862
Name:  ? Seita.2G086200 Secondary Identifier:  ? PAC:32721247
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G086200 0.5kb upstream 0.5kb upstream 4815 true scaffold_2: 7767597-7772411 Setaria italica
Seita.2G086200 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7767597-7768096 Setaria italica
Seita.2G086200 0.5kb downstream 0.5kb downstream 4815 true scaffold_2: 7768097-7772911 Setaria italica
Seita.2G086200 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7772412-7772911 Setaria italica
Seita.2G086200 1.0kb upstream 1.0kb upstream 5315 true scaffold_2: 7767097-7772411 Setaria italica
Seita.2G086200 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7767097-7768096 Setaria italica
Seita.2G086200 1.0kb downstream 1.0kb downstream 5315 true scaffold_2: 7768097-7773411 Setaria italica
Seita.2G086200 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7772412-7773411 Setaria italica
Seita.2G086200 2.0kb upstream 2.0kb upstream 6315 true scaffold_2: 7766097-7772411 Setaria italica
Seita.2G086200 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7766097-7768096 Setaria italica
Seita.2G086200 2.0kb downstream 2.0kb downstream 6315 true scaffold_2: 7768097-7774411 Setaria italica
Seita.2G086200 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7772412-7774411 Setaria italica
Seita.2G086200 5.0kb upstream 5.0kb upstream 9315 true scaffold_2: 7763097-7772411 Setaria italica
Seita.2G086200 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7763097-7768096 Setaria italica
Seita.2G086200 5.0kb downstream 5.0kb downstream 9315 true scaffold_2: 7768097-7777411 Setaria italica
Seita.2G086200 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7772412-7777411 Setaria italica
Seita.2G086200 10.0kb upstream 10.0kb upstream 14315 true scaffold_2: 7758097-7772411 Setaria italica
Seita.2G086200 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7758097-7768096 Setaria italica
Seita.2G086200 10.0kb downstream 10.0kb downstream 14315 true scaffold_2: 7768097-7782411 Setaria italica
Seita.2G086200 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7772412-7782411 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179941 5267 Panicoideae View MSA
124581021 5269 Grass View MSA
122042741 5273 Angiosperm View MSA
121346394 5274 Embryophyte View MSA
123426643 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.114        
cufflinks 1.098        
cufflinks 0.442       Low
cufflinks 0.237       Low
cufflinks 0.449       Low
cufflinks 0.95        
cufflinks 1.093        
cufflinks 1.05        
cufflinks 0.919        
cufflinks 1.411        
cufflinks 1.058        
cufflinks 1.228        
cufflinks 0.762        
cufflinks 1.102        
cufflinks 2.099       High
cufflinks 0.78        
cufflinks 1.743       High
cufflinks 0.423       Low
cufflinks 0.26       Low
cufflinks 1.597       High

0 Strain