Gene : Seita.2G031800 S. italica v2.2
Defline:  (1 of 1) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  318
Name:  ? Seita.2G031800 Secondary Identifier:  ? PAC:32721662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G031800 0.5kb upstream 0.5kb upstream 4566 true scaffold_2: 2543309-2547874 Setaria italica
Seita.2G031800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2547375-2547874 Setaria italica
Seita.2G031800 0.5kb downstream 0.5kb downstream 4566 true scaffold_2: 2542809-2547374 Setaria italica
Seita.2G031800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2542809-2543308 Setaria italica
Seita.2G031800 1.0kb upstream 1.0kb upstream 5066 true scaffold_2: 2543309-2548374 Setaria italica
Seita.2G031800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2547375-2548374 Setaria italica
Seita.2G031800 1.0kb downstream 1.0kb downstream 5066 true scaffold_2: 2542309-2547374 Setaria italica
Seita.2G031800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2542309-2543308 Setaria italica
Seita.2G031800 2.0kb upstream 2.0kb upstream 6066 true scaffold_2: 2543309-2549374 Setaria italica
Seita.2G031800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2547375-2549374 Setaria italica
Seita.2G031800 2.0kb downstream 2.0kb downstream 6066 true scaffold_2: 2541309-2547374 Setaria italica
Seita.2G031800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2541309-2543308 Setaria italica
Seita.2G031800 5.0kb upstream 5.0kb upstream 9066 true scaffold_2: 2543309-2552374 Setaria italica
Seita.2G031800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2547375-2552374 Setaria italica
Seita.2G031800 5.0kb downstream 5.0kb downstream 9066 true scaffold_2: 2538309-2547374 Setaria italica
Seita.2G031800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2538309-2543308 Setaria italica
Seita.2G031800 10.0kb upstream 10.0kb upstream 14066 true scaffold_2: 2543309-2557374 Setaria italica
Seita.2G031800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2547375-2557374 Setaria italica
Seita.2G031800 10.0kb downstream 10.0kb downstream 14066 true scaffold_2: 2533309-2547374 Setaria italica
Seita.2G031800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2533309-2543308 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178959 5267 Panicoideae View MSA
124579686 5269 Grass View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.528     High  
cufflinks 38.506     High Low
cufflinks 149.766     High High
cufflinks 142.546     High High
cufflinks 159.263     High High
cufflinks 48.523     High  
cufflinks 109.153     High  
cufflinks 103.199     High  
cufflinks 134.835     High High
cufflinks 43.348     High Low
cufflinks 101.389     High  
cufflinks 39.409     High Low
cufflinks 68.296     High  
cufflinks 105.729     High  
cufflinks 40.676     High Low
cufflinks 118.567     High  
cufflinks 56.95     High  
cufflinks 67.731     High  
cufflinks 88.626     High  
cufflinks 42.811     High Low

0 Strain