Gene : Seita.2G032600 S. italica v2.2
Defline:  (1 of 3) PTHR23500:SF149 - INOSITOL TRANSPORTER 4-RELATED Genomic Order:  326
Name:  ? Seita.2G032600 Secondary Identifier:  ? PAC:32719133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G032600 0.5kb upstream 0.5kb upstream 3130 true scaffold_2: 2675028-2678157 Setaria italica
Seita.2G032600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2675028-2675527 Setaria italica
Seita.2G032600 0.5kb downstream 0.5kb downstream 3130 true scaffold_2: 2675528-2678657 Setaria italica
Seita.2G032600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2678158-2678657 Setaria italica
Seita.2G032600 1.0kb upstream 1.0kb upstream 3630 true scaffold_2: 2674528-2678157 Setaria italica
Seita.2G032600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2674528-2675527 Setaria italica
Seita.2G032600 1.0kb downstream 1.0kb downstream 3630 true scaffold_2: 2675528-2679157 Setaria italica
Seita.2G032600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2678158-2679157 Setaria italica
Seita.2G032600 2.0kb upstream 2.0kb upstream 4630 true scaffold_2: 2673528-2678157 Setaria italica
Seita.2G032600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2673528-2675527 Setaria italica
Seita.2G032600 2.0kb downstream 2.0kb downstream 4630 true scaffold_2: 2675528-2680157 Setaria italica
Seita.2G032600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2678158-2680157 Setaria italica
Seita.2G032600 5.0kb upstream 5.0kb upstream 7630 true scaffold_2: 2670528-2678157 Setaria italica
Seita.2G032600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2670528-2675527 Setaria italica
Seita.2G032600 5.0kb downstream 5.0kb downstream 7630 true scaffold_2: 2675528-2683157 Setaria italica
Seita.2G032600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2678158-2683157 Setaria italica
Seita.2G032600 10.0kb upstream 10.0kb upstream 12630 true scaffold_2: 2665528-2678157 Setaria italica
Seita.2G032600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2665528-2675527 Setaria italica
Seita.2G032600 10.0kb downstream 10.0kb downstream 12630 true scaffold_2: 2675528-2688157 Setaria italica
Seita.2G032600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2678158-2688157 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194627 5267 Panicoideae View MSA
124571238 5269 Grass View MSA
122041664 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121348445 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.244        
cufflinks 2.955        
cufflinks 0.763        
cufflinks 1.009        
cufflinks 0.756        
cufflinks 2.475        
cufflinks 2.148        
cufflinks 0.977        
cufflinks 0.984        
cufflinks 5.216       High
cufflinks 4.28       High
cufflinks 0.154       Low
cufflinks 1.033        
cufflinks 3.598       High
cufflinks 0.662        
cufflinks 2.961        
cufflinks 0.201       Low
cufflinks 1.05        
cufflinks 1.314        
cufflinks 0.317       Low

0 Strain