Gene : Seita.2G130700 S. italica v2.2
Defline:  (1 of 1) PTHR34937:SF1 - MYOSIN HEAVY CHAIN-RELATED Genomic Order:  1307
Name:  ? Seita.2G130700 Secondary Identifier:  ? PAC:32723496
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G130700 0.5kb upstream 0.5kb upstream 4624 true scaffold_2: 15099784-15104407 Setaria italica
Seita.2G130700 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 15103908-15104407 Setaria italica
Seita.2G130700 0.5kb downstream 0.5kb downstream 4624 true scaffold_2: 15099284-15103907 Setaria italica
Seita.2G130700 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 15099284-15099783 Setaria italica
Seita.2G130700 1.0kb upstream 1.0kb upstream 5124 true scaffold_2: 15099784-15104907 Setaria italica
Seita.2G130700 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 15103908-15104907 Setaria italica
Seita.2G130700 1.0kb downstream 1.0kb downstream 5124 true scaffold_2: 15098784-15103907 Setaria italica
Seita.2G130700 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 15098784-15099783 Setaria italica
Seita.2G130700 2.0kb upstream 2.0kb upstream 6124 true scaffold_2: 15099784-15105907 Setaria italica
Seita.2G130700 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 15103908-15105907 Setaria italica
Seita.2G130700 2.0kb downstream 2.0kb downstream 6124 true scaffold_2: 15097784-15103907 Setaria italica
Seita.2G130700 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 15097784-15099783 Setaria italica
Seita.2G130700 5.0kb upstream 5.0kb upstream 9124 true scaffold_2: 15099784-15108907 Setaria italica
Seita.2G130700 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 15103908-15108907 Setaria italica
Seita.2G130700 5.0kb downstream 5.0kb downstream 9124 true scaffold_2: 15094784-15103907 Setaria italica
Seita.2G130700 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 15094784-15099783 Setaria italica
Seita.2G130700 10.0kb upstream 10.0kb upstream 14124 true scaffold_2: 15099784-15113907 Setaria italica
Seita.2G130700 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 15103908-15113907 Setaria italica
Seita.2G130700 10.0kb downstream 10.0kb downstream 14124 true scaffold_2: 15089784-15103907 Setaria italica
Seita.2G130700 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 15089784-15099783 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179976 5267 Panicoideae View MSA
124570937 5269 Grass View MSA
122044553 5273 Angiosperm View MSA
121345733 5274 Embryophyte View MSA
123380261 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.261        
cufflinks 7.54        
cufflinks 4.859        
cufflinks 4.988        
cufflinks 4.118       Low
cufflinks 7.838        
cufflinks 5.891        
cufflinks 5.524        
cufflinks 3.876       Low
cufflinks 4.427       Low
cufflinks 7.54        
cufflinks 10.313       High
cufflinks 6.863        
cufflinks 6.453        
cufflinks 11.237       High
cufflinks 4.879        
cufflinks 9.86       High
cufflinks 7.944        
cufflinks 5.345        
cufflinks 10.726       High

0 Strain