Gene : Seita.2G144200 S. italica v2.2
Defline:  (1 of 2) PTHR24115:SF463 - KINESIN-LIKE PROTEIN-RELATED Genomic Order:  1442
Name:  ? Seita.2G144200 Secondary Identifier:  ? PAC:32720808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G144200 0.5kb upstream 0.5kb upstream 9950 true scaffold_2: 17264185-17274134 Setaria italica
Seita.2G144200 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 17264185-17264684 Setaria italica
Seita.2G144200 0.5kb downstream 0.5kb downstream 9950 true scaffold_2: 17264685-17274634 Setaria italica
Seita.2G144200 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 17274135-17274634 Setaria italica
Seita.2G144200 1.0kb upstream 1.0kb upstream 10450 true scaffold_2: 17263685-17274134 Setaria italica
Seita.2G144200 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 17263685-17264684 Setaria italica
Seita.2G144200 1.0kb downstream 1.0kb downstream 10450 true scaffold_2: 17264685-17275134 Setaria italica
Seita.2G144200 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 17274135-17275134 Setaria italica
Seita.2G144200 2.0kb upstream 2.0kb upstream 11450 true scaffold_2: 17262685-17274134 Setaria italica
Seita.2G144200 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 17262685-17264684 Setaria italica
Seita.2G144200 2.0kb downstream 2.0kb downstream 11450 true scaffold_2: 17264685-17276134 Setaria italica
Seita.2G144200 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 17274135-17276134 Setaria italica
Seita.2G144200 5.0kb upstream 5.0kb upstream 14450 true scaffold_2: 17259685-17274134 Setaria italica
Seita.2G144200 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 17259685-17264684 Setaria italica
Seita.2G144200 5.0kb downstream 5.0kb downstream 14450 true scaffold_2: 17264685-17279134 Setaria italica
Seita.2G144200 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 17274135-17279134 Setaria italica
Seita.2G144200 10.0kb upstream 10.0kb upstream 19450 true scaffold_2: 17254685-17274134 Setaria italica
Seita.2G144200 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 17254685-17264684 Setaria italica
Seita.2G144200 10.0kb downstream 10.0kb downstream 19450 true scaffold_2: 17264685-17284134 Setaria italica
Seita.2G144200 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 17274135-17284134 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189564 5267 Panicoideae View MSA
124580749 5269 Grass View MSA
122051083 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350608 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.97        
cufflinks 18.649     High High
cufflinks 3.606        
cufflinks 3.99        
cufflinks 3.935        
cufflinks 18.642     High High
cufflinks 12.788       High
cufflinks 8.485        
cufflinks 9.544        
cufflinks 3.935        
cufflinks 11.042        
cufflinks 4.486        
cufflinks 6.136        
cufflinks 2.54       Low
cufflinks 7.292        
cufflinks 7.027        
cufflinks 3.899        
cufflinks 3.843        
cufflinks 2.827       Low
cufflinks 6.18        

0 Strain