Gene : Seita.2G148100 S. italica v2.2
Genomic Order:  1481 Name:  ? Seita.2G148100
Secondary Identifier:  ? PAC:32721966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G148100 0.5kb upstream 0.5kb upstream 1204 true scaffold_2: 19490827-19492030 Setaria italica
Seita.2G148100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 19491531-19492030 Setaria italica
Seita.2G148100 0.5kb downstream 0.5kb downstream 1204 true scaffold_2: 19490327-19491530 Setaria italica
Seita.2G148100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 19490327-19490826 Setaria italica
Seita.2G148100 1.0kb upstream 1.0kb upstream 1704 true scaffold_2: 19490827-19492530 Setaria italica
Seita.2G148100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 19491531-19492530 Setaria italica
Seita.2G148100 1.0kb downstream 1.0kb downstream 1704 true scaffold_2: 19489827-19491530 Setaria italica
Seita.2G148100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 19489827-19490826 Setaria italica
Seita.2G148100 2.0kb upstream 2.0kb upstream 2704 true scaffold_2: 19490827-19493530 Setaria italica
Seita.2G148100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 19491531-19493530 Setaria italica
Seita.2G148100 2.0kb downstream 2.0kb downstream 2704 true scaffold_2: 19488827-19491530 Setaria italica
Seita.2G148100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 19488827-19490826 Setaria italica
Seita.2G148100 5.0kb upstream 5.0kb upstream 5704 true scaffold_2: 19490827-19496530 Setaria italica
Seita.2G148100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 19491531-19496530 Setaria italica
Seita.2G148100 5.0kb downstream 5.0kb downstream 5704 true scaffold_2: 19485827-19491530 Setaria italica
Seita.2G148100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 19485827-19490826 Setaria italica
Seita.2G148100 10.0kb upstream 10.0kb upstream 10704 true scaffold_2: 19490827-19501530 Setaria italica
Seita.2G148100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 19491531-19501530 Setaria italica
Seita.2G148100 10.0kb downstream 10.0kb downstream 10704 true scaffold_2: 19480827-19491530 Setaria italica
Seita.2G148100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 19480827-19490826 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189789 5267 Panicoideae View MSA
124576635 5269 Grass View MSA
122049637 5273 Angiosperm View MSA
121311516 5274 Embryophyte View MSA
123348802 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain