Gene : Seita.2G152900 S. italica v2.2
Defline:  (1 of 4) 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase Genomic Order:  1529
Name:  ? Seita.2G152900 Secondary Identifier:  ? PAC:32720682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G152900 0.5kb upstream 0.5kb upstream 14790 true scaffold_2: 21418897-21433686 Setaria italica
Seita.2G152900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 21418897-21419396 Setaria italica
Seita.2G152900 0.5kb downstream 0.5kb downstream 14790 true scaffold_2: 21419397-21434186 Setaria italica
Seita.2G152900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 21433687-21434186 Setaria italica
Seita.2G152900 1.0kb upstream 1.0kb upstream 15290 true scaffold_2: 21418397-21433686 Setaria italica
Seita.2G152900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 21418397-21419396 Setaria italica
Seita.2G152900 1.0kb downstream 1.0kb downstream 15290 true scaffold_2: 21419397-21434686 Setaria italica
Seita.2G152900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 21433687-21434686 Setaria italica
Seita.2G152900 2.0kb upstream 2.0kb upstream 16290 true scaffold_2: 21417397-21433686 Setaria italica
Seita.2G152900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 21417397-21419396 Setaria italica
Seita.2G152900 2.0kb downstream 2.0kb downstream 16290 true scaffold_2: 21419397-21435686 Setaria italica
Seita.2G152900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 21433687-21435686 Setaria italica
Seita.2G152900 5.0kb upstream 5.0kb upstream 19290 true scaffold_2: 21414397-21433686 Setaria italica
Seita.2G152900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 21414397-21419396 Setaria italica
Seita.2G152900 5.0kb downstream 5.0kb downstream 19290 true scaffold_2: 21419397-21438686 Setaria italica
Seita.2G152900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 21433687-21438686 Setaria italica
Seita.2G152900 10.0kb upstream 10.0kb upstream 24290 true scaffold_2: 21409397-21433686 Setaria italica
Seita.2G152900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 21409397-21419396 Setaria italica
Seita.2G152900 10.0kb downstream 10.0kb downstream 24290 true scaffold_2: 21419397-21443686 Setaria italica
Seita.2G152900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 21433687-21443686 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122064084 5267 Panicoideae View MSA
124590070 5269 Grass View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.251        
cufflinks 6.993       High
cufflinks 5.934        
cufflinks 4.635        
cufflinks 4.366        
cufflinks 6.947       High
cufflinks 6.247       High
cufflinks 3.344        
cufflinks 4.756        
cufflinks 1.785       Low
cufflinks 4.878        
cufflinks 1.696       Low
cufflinks 3.332        
cufflinks 3.899        
cufflinks 3.754        
cufflinks 5.613        
cufflinks 1.692       Low
cufflinks 3.765        
cufflinks 3.305        
cufflinks 2.44       Low

0 Strain