Gene : Seita.2G112900 S. italica v2.2
Defline:  (1 of 1) PTHR10459:SF60 - POLY [ADP-RIBOSE] POLYMERASE 1 Genomic Order:  1129
Name:  ? Seita.2G112900 Secondary Identifier:  ? PAC:32720832
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G112900 0.5kb upstream 0.5kb upstream 11834 true scaffold_2: 11020867-11032700 Setaria italica
Seita.2G112900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11020867-11021366 Setaria italica
Seita.2G112900 0.5kb downstream 0.5kb downstream 11834 true scaffold_2: 11021367-11033200 Setaria italica
Seita.2G112900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11032701-11033200 Setaria italica
Seita.2G112900 1.0kb upstream 1.0kb upstream 12334 true scaffold_2: 11020367-11032700 Setaria italica
Seita.2G112900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11020367-11021366 Setaria italica
Seita.2G112900 1.0kb downstream 1.0kb downstream 12334 true scaffold_2: 11021367-11033700 Setaria italica
Seita.2G112900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11032701-11033700 Setaria italica
Seita.2G112900 2.0kb upstream 2.0kb upstream 13334 true scaffold_2: 11019367-11032700 Setaria italica
Seita.2G112900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11019367-11021366 Setaria italica
Seita.2G112900 2.0kb downstream 2.0kb downstream 13334 true scaffold_2: 11021367-11034700 Setaria italica
Seita.2G112900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11032701-11034700 Setaria italica
Seita.2G112900 5.0kb upstream 5.0kb upstream 16334 true scaffold_2: 11016367-11032700 Setaria italica
Seita.2G112900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11016367-11021366 Setaria italica
Seita.2G112900 5.0kb downstream 5.0kb downstream 16334 true scaffold_2: 11021367-11037700 Setaria italica
Seita.2G112900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11032701-11037700 Setaria italica
Seita.2G112900 10.0kb upstream 10.0kb upstream 21334 true scaffold_2: 11011367-11032700 Setaria italica
Seita.2G112900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11011367-11021366 Setaria italica
Seita.2G112900 10.0kb downstream 10.0kb downstream 21334 true scaffold_2: 11021367-11042700 Setaria italica
Seita.2G112900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11032701-11042700 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193685 5267 Panicoideae View MSA
124579687 5269 Grass View MSA
122044307 5273 Angiosperm View MSA
121344199 5274 Embryophyte View MSA
123379997 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.149        
cufflinks 4.782       High
cufflinks 0.905       Low
cufflinks 0.693       Low
cufflinks 1.1       Low
cufflinks 4.983       High
cufflinks 3.322        
cufflinks 2.902        
cufflinks 2.54        
cufflinks 1.484        
cufflinks 3.179        
cufflinks 2.3        
cufflinks 1.855        
cufflinks 0.859       Low
cufflinks 2.757        
cufflinks 3.064        
cufflinks 2.446        
cufflinks 1.593        
cufflinks 0.687       Low
cufflinks 2.709        

0 Strain