Gene : Seita.2G114900 S. italica v2.2
Defline:  (1 of 1) PTHR22762:SF7 - ALPHA GLUCOSIDASE-LIKE PROTEIN Genomic Order:  1149
Name:  ? Seita.2G114900 Secondary Identifier:  ? PAC:32722208
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G114900 0.5kb upstream 0.5kb upstream 12369 true scaffold_2: 11418408-11430776 Setaria italica
Seita.2G114900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11418408-11418907 Setaria italica
Seita.2G114900 0.5kb downstream 0.5kb downstream 12369 true scaffold_2: 11418908-11431276 Setaria italica
Seita.2G114900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11430777-11431276 Setaria italica
Seita.2G114900 1.0kb upstream 1.0kb upstream 12869 true scaffold_2: 11417908-11430776 Setaria italica
Seita.2G114900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11417908-11418907 Setaria italica
Seita.2G114900 1.0kb downstream 1.0kb downstream 12869 true scaffold_2: 11418908-11431776 Setaria italica
Seita.2G114900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11430777-11431776 Setaria italica
Seita.2G114900 2.0kb upstream 2.0kb upstream 13869 true scaffold_2: 11416908-11430776 Setaria italica
Seita.2G114900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11416908-11418907 Setaria italica
Seita.2G114900 2.0kb downstream 2.0kb downstream 13869 true scaffold_2: 11418908-11432776 Setaria italica
Seita.2G114900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11430777-11432776 Setaria italica
Seita.2G114900 5.0kb upstream 5.0kb upstream 16869 true scaffold_2: 11413908-11430776 Setaria italica
Seita.2G114900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11413908-11418907 Setaria italica
Seita.2G114900 5.0kb downstream 5.0kb downstream 16869 true scaffold_2: 11418908-11435776 Setaria italica
Seita.2G114900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11430777-11435776 Setaria italica
Seita.2G114900 10.0kb upstream 10.0kb upstream 21869 true scaffold_2: 11408908-11430776 Setaria italica
Seita.2G114900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11408908-11418907 Setaria italica
Seita.2G114900 10.0kb downstream 10.0kb downstream 21869 true scaffold_2: 11418908-11440776 Setaria italica
Seita.2G114900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11430777-11440776 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196002 5267 Panicoideae View MSA
124580459 5269 Grass View MSA
122042416 5273 Angiosperm View MSA
121343930 5274 Embryophyte View MSA
123379942 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.448        
cufflinks 4.207        
cufflinks 2.172        
cufflinks 1.801        
cufflinks 1.542       Low
cufflinks 3.447        
cufflinks 3.039        
cufflinks 4.484        
cufflinks 3.148        
cufflinks 3.532        
cufflinks 6.694        
cufflinks 5.551        
cufflinks 10.804       High
cufflinks 2.169        
cufflinks 7.501       High
cufflinks 1.576       Low
cufflinks 6.052        
cufflinks 0.73       Low
cufflinks 2.4        
cufflinks 7.763       High

0 Strain