Gene : Seita.2G116100 S. italica v2.2
Defline:  (1 of 1) PTHR31585:SF12 - FOLATE-BIOPTERIN TRANSPORTER 8, CHLOROPLASTIC-RELATED Genomic Order:  1161
Name:  ? Seita.2G116100 Secondary Identifier:  ? PAC:32718796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G116100 0.5kb upstream 0.5kb upstream 4091 true scaffold_2: 11693681-11697771 Setaria italica
Seita.2G116100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11697272-11697771 Setaria italica
Seita.2G116100 0.5kb downstream 0.5kb downstream 4091 true scaffold_2: 11693181-11697271 Setaria italica
Seita.2G116100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11693181-11693680 Setaria italica
Seita.2G116100 1.0kb upstream 1.0kb upstream 4591 true scaffold_2: 11693681-11698271 Setaria italica
Seita.2G116100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11697272-11698271 Setaria italica
Seita.2G116100 1.0kb downstream 1.0kb downstream 4591 true scaffold_2: 11692681-11697271 Setaria italica
Seita.2G116100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11692681-11693680 Setaria italica
Seita.2G116100 2.0kb upstream 2.0kb upstream 5591 true scaffold_2: 11693681-11699271 Setaria italica
Seita.2G116100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11697272-11699271 Setaria italica
Seita.2G116100 2.0kb downstream 2.0kb downstream 5591 true scaffold_2: 11691681-11697271 Setaria italica
Seita.2G116100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11691681-11693680 Setaria italica
Seita.2G116100 5.0kb upstream 5.0kb upstream 8591 true scaffold_2: 11693681-11702271 Setaria italica
Seita.2G116100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11697272-11702271 Setaria italica
Seita.2G116100 5.0kb downstream 5.0kb downstream 8591 true scaffold_2: 11688681-11697271 Setaria italica
Seita.2G116100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11688681-11693680 Setaria italica
Seita.2G116100 10.0kb upstream 10.0kb upstream 13591 true scaffold_2: 11693681-11707271 Setaria italica
Seita.2G116100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11697272-11707271 Setaria italica
Seita.2G116100 10.0kb downstream 10.0kb downstream 13591 true scaffold_2: 11683681-11697271 Setaria italica
Seita.2G116100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11683681-11693680 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197421 5267 Panicoideae View MSA
124569733 5269 Grass View MSA
122049855 5273 Angiosperm View MSA
121350266 5274 Embryophyte View MSA
123425895 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.785        
cufflinks 1.566        
cufflinks 0.102       Low
cufflinks 0.029     Low Low
cufflinks 0.344        
cufflinks 1.452        
cufflinks 1.686       High
cufflinks 1.002        
cufflinks 1.624        
cufflinks 0.175     Low  
cufflinks 0.337        
cufflinks 0.106     Low Low
cufflinks 0.269        
cufflinks 0.594        
cufflinks 0.453        
cufflinks 1.447        
cufflinks 0.13     Low Low
cufflinks 0.37        
cufflinks 5.93       High
cufflinks 0.35        

0 Strain